RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ADH7P40394 386 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 CD97P48960 835 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 MEOX1P50221 254 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 FUT5Q11128 374 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 BNIP1Q12981 228 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 LIN52Q52LA3 116 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 FAM180AQ6UWF9 173 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 C6orf89Q6UWU4 347 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 BNC2Q6ZN30 1099 aaPredicted RBP18.38■□□□□ 0.53
USP53-203ENST00000507597 EIF3MQ7L2H7 374 aaKnown RBP18.38■□□□□ 0.53
USP53-203ENST00000507597 CALHM3Q86XJ0 350 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 RBM15BQ8NDT2 890 aaKnown RBP18.38■□□□□ 0.53
USP53-203ENST00000507597 PHOSPHO1Q8TCT1 267 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 RNF138Q8WVD3 245 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 WDR60Q8WVS4 1066 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 SLC39A7Q92504 469 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 MAL2Q969L2 176 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 JSRP1Q96MG2 331 aaPredicted RBP18.38■□□□□ 0.53
USP53-203ENST00000507597 ZNF583Q96ND8 569 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 CDRT15Q96T59 188 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 EVA1AQ9H8M9 152 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 ZFP64Q9NPA5 681 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 AGPAT4Q9NRZ5 378 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 FBXO34Q9NWN3 711 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 CMTM6Q9NX76 183 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 SLC13A4Q9UKG4 626 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 PRDM4Q9UKN5 801 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 CSAG2Q9Y5P2 127 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 SCO2O43819 266 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 UGT2B17O75795 530 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 CBR3O75828 277 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 STAMBPO95630 424 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 THBS1P07996 1170 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 GPR85P60893 370 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 ADRM1Q16186 407 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 NADK2Q4G0N4 442 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 KLHL26Q53HC5 615 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 EIPR1Q53HC9 387 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.37■□□□□ 0.53
USP53-203ENST00000507597 ZZZ3Q8IYH5 903 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 MICU2Q8IYU8 434 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 ZFP62Q8NB50 900 aaPredicted RBP18.37■□□□□ 0.53
USP53-203ENST00000507597 OR4K17Q8NGC6 315 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 OR52P1PQ8NH57 321 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 TRIM8Q9BZR9 551 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 PIF1Q9H611 641 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 QPCTLQ9NXS2 382 aa18.37■□□□□ 0.53
USP53-203ENST00000507597 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.37■□□□□ 0.53
USP53-203ENST00000507597 USP24Q9UPU5 2620 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 DSPP15924 2871 aaKnown RBP18.36■□□□□ 0.53
USP53-203ENST00000507597 PRAMEF27A3QJZ7 478 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 SERINC4A6NH21 518 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 AGAP5A6NIR3 686 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 FAM47E-STBD1D6RA91 191 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 NPIPB9F8W1W9 429 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 EIF4E2O60573 245 aaKnown RBP18.36■□□□□ 0.53
USP53-203ENST00000507597 DNASE1L1P49184 302 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 PDZK1Q5T2W1 519 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 PCSK4Q6UW60 755 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 ZAR1Q86SH2 424 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 MARCH3Q86UD3 253 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 PTRH1Q86Y79 214 aaKnown RBP18.36■□□□□ 0.53
USP53-203ENST00000507597 PTOV1Q86YD1 416 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 PLCZ1Q86YW0 608 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 FRMD6Q96NE9 622 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 BTBD10Q9BSF8 475 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 HES7Q9BYE0 225 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 KLHL28Q9NXS3 571 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 TAS2R1Q9NYW7 299 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 SEC14L3Q9UDX4 400 aa18.36■□□□□ 0.53
USP53-203ENST00000507597 DSPPQ9NZW4 1301 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 NME4O00746 187 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 SNPHO15079 494 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 TRIM3O75382 744 aaPredicted RBP18.35■□□□□ 0.53
USP53-203ENST00000507597 CSTAP01040 98 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 NID1P14543 1247 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 UQCRBP14927 111 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 HTR1EP28566 365 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 GCKP35557 465 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 GSK3BP49841 420 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 GZMMP51124 257 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 KCNJ10P78508 379 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 ALDH6A1Q02252 535 aaKnown RBP18.35■□□□□ 0.53
USP53-203ENST00000507597 NFATC3Q12968 1075 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 FGFBP1Q14512 234 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 ZNF311Q5JNZ3 666 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 TIGD3Q6B0B8 471 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 DESI1Q6ICB0 168 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 RINLQ6ZS11 566 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 ZNF440Q8IYI8 595 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 DUSP19Q8WTR2 217 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 GALNT9Q9HCQ5 603 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 TUBA8Q9NY65 449 aaPredicted RBP18.35■□□□□ 0.53
USP53-203ENST00000507597 GPC6Q9Y625 555 aaPredicted RBP18.35■□□□□ 0.53
USP53-203ENST00000507597 MGAQ8IWI9 3026 aa18.35■□□□□ 0.53
USP53-203ENST00000507597 NPIPA5A0A0B4J1W7 369 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 TTLL8A6PVC2 850 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 NPIPA7E9PJI5 369 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 G3V3Y1 287 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 ZNF264O43296 627 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms