RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 CPA2P48052 419 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 EEFSECP57772 596 aaKnown RBP12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 IFFO1Q0D2I5 559 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 PTGR1Q14914 329 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 POU4F3Q15319 338 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 VPS26BQ4G0F5 336 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 IL23RQ5VWK5 629 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 ZCCHC12Q6PEW1 402 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 LRIG3Q6UXM1 1119 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 R3HCC1LQ7Z5L2 792 aaKnown RBP12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 GGNQ86UU5 652 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 KRTCAP2Q8N6L1 136 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 CNEP1R1Q8N9A8 125 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 FNDC9Q8TBE3 224 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 COQ8BQ96D53 544 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 PGM2Q96G03 612 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 C1orf50Q9BV19 199 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 TMEM109Q9BVC6 243 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 PINK1Q9BXM7 581 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 OPN3Q9H1Y3 402 aaPredicted RBP12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 ACBD3Q9H3P7 528 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 RNF122Q9H9V4 155 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 AP4B1Q9Y6B7 739 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 KCNE3Q9Y6H6 103 aa12.95□□□□□ -0.34
CDC42SE2-209ENST00000506419 SH3D21A4FU49 640 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 SCAMP2O15127 329 aaKnown RBP12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 NDUFB5O43674 189 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 ITM2AO43736 263 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 AQP8O94778 261 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 HMGN2P05204 90 aaKnown RBP12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 ALOX5P09917 674 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 DNASE1P24855 282 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 PSMA4P25789 261 aaKnown RBP12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 PON3Q15166 354 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 GUSBP1Q15486 140 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 OR2A2Q6IF42 318 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 WDR93Q6P2C0 686 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 C22orf34Q6ZV56 151 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 SZRD1Q7Z422 152 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 RIMKLAQ8IXN7 391 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 METTL25Q8N6Q8 603 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 ZNF610Q8N9Z0 462 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 PSMA8Q8TAA3 256 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 POC1BQ8TC44 478 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 OR5P2Q8WZ92 322 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 SMPDL3BQ92485 455 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 CAVIN3Q969G5 261 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 ADGRG7Q96K78 797 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 WFIKKN1Q96NZ8 548 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 MS4A4EQ96PG1 132 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 CXorf36Q9H7Y0 433 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 ZCCHC3Q9NUD5 404 aaKnown RBP12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 VDAC3Q9Y277 283 aa12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 V9GYY5 206 aaPredicted RBP12.94□□□□□ -0.34
CDC42SE2-209ENST00000506419 ACANP16112 2415 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 C2CD3Q4AC94 2353 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 TMEM114B3SHH9 223 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 SIAH2O43255 324 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 OIP5O43482 229 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 EFNA2O43921 213 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 LYPLA1O75608 230 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 SMNDC1O75940 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 ATE1O95260 518 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 C6orf47O95873 294 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 IL11P20809 199 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 SERPINB5P36952 375 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 CCT3P49368 545 aaKnown RBP12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 RNF144AP50876 292 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 SIRPAP78324 504 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 LASP1Q14847 261 aaKnown RBP12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 CD226Q15762 336 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 CPTPQ5TA50 214 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 EMBQ6PCB8 327 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 TGIF2LYQ8IUE0 185 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 HOMEZQ8IX15 550 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 CDS1Q92903 461 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 ZBTB9Q96C00 473 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 ZNF524Q96C55 264 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 MBD6Q96DN6 1003 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 SH3YL1Q96HL8 342 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 BTBD2Q9BX70 525 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 C20orf27Q9GZN8 174 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 PIGUQ9H490 435 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 UBQLN4Q9NRR5 601 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 MED17Q9NVC6 651 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 GPATCH2Q9NW75 528 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 ZNF175Q9Y473 711 aa12.93□□□□□ -0.34
CDC42SE2-209ENST00000506419 A0A087WZY1 265 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 WDR91A4D1P6 747 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 SKAP2O75563 359 aaPredicted RBP12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 G6PDP11413 515 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 CD99P14209 185 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 MAPK1P28482 360 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 LCN1P31025 176 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 HPCAL1P37235 193 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 CD79BP40259 229 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 SERPINB4P48594 390 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 PCYT1AP49585 367 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 PRIM2P49643 509 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms