RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 YIPF3Q9GZM5 350 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 PLCXD1Q9NUJ7 323 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 C14orf105Q9NVL8 296 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 PAK1IP1Q9NWT1 392 aaPredicted RBP20.36■□□□□ 0.85
PTPN13-205ENST00000502971 SIDT1Q9NXL6 827 aaKnown RBP20.36■□□□□ 0.85
PTPN13-205ENST00000502971 ZNF226Q9NYT6 803 aa20.36■□□□□ 0.85
PTPN13-205ENST00000502971 TRAPPC13A5PLN9 417 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 CCDC160A6NGH7 325 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 H3BSA7 217 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 FAM20BO75063 409 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 HTR1AP08908 422 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 HBQ1P09105 142 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 GABRB1P18505 474 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 POU1F1P28069 291 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 KRT20P35900 424 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 ATP12AP54707 1039 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 TCF15Q12870 199 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 PMS2P3Q13401 168 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 NSDHLQ15738 373 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 PDZK1Q5T2W1 519 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 COX15Q7KZN9 410 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 BPHLQ86WA6 291 aaPredicted RBP20.35■□□□□ 0.85
PTPN13-205ENST00000502971 BCORP1Q8N888 145 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 OR14A16Q8NHC5 309 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 PIGXQ8TBF5 258 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 SGCDQ92629 289 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 DAZLQ92904 295 aaKnown RBP20.35■□□□□ 0.85
PTPN13-205ENST00000502971 VN1R1Q9GZP7 353 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 NTNG1Q9Y2I2 539 aa20.35■□□□□ 0.85
PTPN13-205ENST00000502971 IGLV3-12A0A075B6K2 115 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 A8MUA0 341 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 NPIPB9F8W1W9 429 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 H3BN98 237 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 SCRG1O75711 98 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 THY1P04216 161 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 IGKV3-11P04433 115 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 ZNF883P0CG24 379 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 PPICP45877 212 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 TRA2AQ13595 282 aaKnown RBP eCLIP20.34■□□□□ 0.85
PTPN13-205ENST00000502971 SLX4IPQ5VYV7 408 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 SLITRK4Q8IW52 837 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 CMIPQ8IY22 773 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 SLC2A12Q8TD20 617 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 ZNF721Q8TF20 911 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 OIT3Q8WWZ8 545 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 SLC22A11Q9NSA0 550 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 MKL2Q9ULH7 1088 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 PCDHGB1Q9Y5G3 927 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 LAMA1P25391 3075 aa20.34■□□□□ 0.85
PTPN13-205ENST00000502971 NTN3O00634 580 aaPredicted RBP20.33■□□□□ 0.85
PTPN13-205ENST00000502971 POLR1CO15160 346 aaPredicted RBP20.33■□□□□ 0.85
PTPN13-205ENST00000502971 DDAH2O95865 285 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 TP53P04637 393 aaPredicted RBP20.33■□□□□ 0.85
PTPN13-205ENST00000502971 GKN3PP0CG01 181 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 EFNA3P52797 238 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 OR1Q1Q15612 314 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 NEDD8Q15843 81 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 SMN1Q16637 294 aaKnown RBP20.33■□□□□ 0.85
PTPN13-205ENST00000502971 TMEM236Q5W0B7 351 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 XAF1Q6GPH4 301 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 MBOAT2Q6ZWT7 520 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 PRICKLE2Q7Z3G6 844 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 NKAIN4Q8IVV8 208 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 NLGN4XQ8N0W4 816 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 SUMF1Q8NBK3 374 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 ZNF540Q8NDQ6 660 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 ZNF559Q9BR84 538 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 OR8D2Q9GZM6 311 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 KRCC1Q9NPI7 259 aaPredicted RBP20.33■□□□□ 0.85
PTPN13-205ENST00000502971 SLC7A7Q9UM01 511 aa20.33■□□□□ 0.85
PTPN13-205ENST00000502971 MYO15AQ9UKN7 3530 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 SOX14O95416 240 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 ONECUT2O95948 504 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 PRG2P13727 222 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 HTR2AP28223 471 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 OMPP47874 163 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 DCAF7P61962 342 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 OCA2Q04671 838 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 TSPAN31Q12999 210 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 FGFBP1Q14512 234 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 RAB39AQ14964 217 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 PHF19Q5T6S3 580 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 C12orf73Q69YU5 71 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 PWWP2BQ6NUJ5 590 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 PPP1R3BQ86XI6 285 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 ZSCAN1Q8NBB4 408 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 PRSS33Q8NF86 280 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 CLIP3Q96DZ5 547 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 CTSFQ9UBX1 484 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 RSL24D1Q9UHA3 163 aaKnown RBP20.33■□□□□ 0.84
PTPN13-205ENST00000502971 PCDHGB2Q9Y5G2 931 aa20.33■□□□□ 0.84
PTPN13-205ENST00000502971 LSM11P83369 360 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTPN13-205ENST00000502971 PLAURQ03405 335 aa20.32■□□□□ 0.84
PTPN13-205ENST00000502971 PIGFQ07326 219 aa20.32■□□□□ 0.84
PTPN13-205ENST00000502971 NNATQ16517 81 aa20.32■□□□□ 0.84
PTPN13-205ENST00000502971 NKAIN1Q4KMZ8 207 aa20.32■□□□□ 0.84
PTPN13-205ENST00000502971 LAPTM4BQ86VI4 370 aa20.32■□□□□ 0.84
PTPN13-205ENST00000502971 CCDC103Q8IW40 242 aa20.32■□□□□ 0.84
PTPN13-205ENST00000502971 ZNF614Q8N883 585 aa20.32■□□□□ 0.84
PTPN13-205ENST00000502971 ZNF321PQ8N8H1 164 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms