RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 LAP3P28838 519 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 GDI1P31150 447 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 RPL4P36578 427 aaKnown RBP2.98□□□□□ -1.93
CALD1-224ENST00000498254 GNPDA1P46926 289 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 CSRP3P50461 194 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 PPT1P50897 306 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 ARHGDIAP52565 204 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 CRIP2P52943 208 aaPredicted RBP2.98□□□□□ -1.93
CALD1-224ENST00000498254 HILS1P60008 231 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 FGL1Q08830 312 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 SLC10A1Q14973 349 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 ATXN7L3Q14CW9 347 aaPredicted RBP2.98□□□□□ -1.93
CALD1-224ENST00000498254 ABRAXAS2Q15018 415 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 PDK3Q15120 406 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 SYPL1Q16563 259 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 CCL14Q16627 93 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 C2CD6Q53TS8 623 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 SPATA46Q5T0L3 261 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 REP15Q6BDI9 236 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 ARMCX5Q6P1M9 558 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 ANKRD37Q7Z713 158 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 VSTM4Q8IW00 320 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 CDH26Q8IXH8 852 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 ZNF683Q8IZ20 524 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 SLC7A5P1Q8MH63 180 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 ZSCAN4Q8NAM6 433 aaPredicted RBP2.98□□□□□ -1.93
CALD1-224ENST00000498254 OR5L2Q8NGL0 311 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 OR13C2Q8NGS9 318 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 RNF139Q8WU17 664 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 CRYGNQ8WXF5 182 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 FAM3CQ92520 227 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 FBXO32Q969P5 355 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 MYLPFQ96A32 169 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 SLC45A3Q96JT2 553 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 RBM14Q96PK6 669 aaKnown RBP2.98□□□□□ -1.93
CALD1-224ENST00000498254 CCNL2Q96S94 520 aaPredicted RBP2.98□□□□□ -1.93
CALD1-224ENST00000498254 SYT11Q9BT88 431 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 FGFBP2Q9BYJ0 223 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 NXF5Q9H1B4 397 aaKnown RBP2.98□□□□□ -1.93
CALD1-224ENST00000498254 MEPEQ9NQ76 525 aaPredicted RBP2.98□□□□□ -1.93
CALD1-224ENST00000498254 ABCC13Q9NSE7 274 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 QPCTLQ9NXS2 382 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 MRPL39Q9NYK5 338 aaKnown RBP2.98□□□□□ -1.93
CALD1-224ENST00000498254 AIPL1Q9NZN9 384 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 MLXQ9UH92 298 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 CTNNA3Q9UI47 895 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 NOSIPQ9Y314 301 aaKnown RBP2.98□□□□□ -1.93
CALD1-224ENST00000498254 WDR45Q9Y484 360 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 SPACA6W5XKT8 324 aa2.98□□□□□ -1.93
CALD1-224ENST00000498254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.98□□□□□ -1.93
CALD1-224ENST00000498254 ARPC4-TTLL3A0A0A6YYG9 625 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 ARHGEF35A5YM69 484 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 CCT8L1PA6NM43 557 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 G3V4G9 280 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 KIF2AO00139 706 aaPredicted RBP2.97□□□□□ -1.93
CALD1-224ENST00000498254 CASQ2O14958 399 aaPredicted RBP2.97□□□□□ -1.93
CALD1-224ENST00000498254 TM9SF1O15321 606 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 ARHGEF9O43307 516 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 TYROBPO43914 113 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 B4GALT2O60909 372 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 SMC2O95347 1197 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 SERPINA3P01011 423 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 IGKV3-20P01619 116 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 IGHV3-9P01782 118 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 ALPIP09923 528 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 TRIM49P0CI25 452 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 TRIM49CP0CI26 452 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 ZNF44P15621 663 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 H2AFXP16104 143 aaPredicted RBP2.97□□□□□ -1.93
CALD1-224ENST00000498254 NCK1P16333 377 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 TPSB2P20231 275 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 ATP5A1P25705 553 aaKnown RBP2.97□□□□□ -1.93
CALD1-224ENST00000498254 LMO2P25791 158 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 ACVR1BP36896 505 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 ETV5P41161 510 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 BDH1Q02338 343 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 TRDNQ13061 729 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 CUL1Q13616 776 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 CYLC2Q14093 348 aaPredicted RBP2.97□□□□□ -1.93
CALD1-224ENST00000498254 TPSAB1Q15661 275 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 PCK2Q16822 640 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 IMMTQ16891 758 aaKnown RBP2.97□□□□□ -1.93
CALD1-224ENST00000498254 LEMD1Q68G75 181 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 TMEM225Q6GV28 225 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 OR8G2PQ6IF36 304 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 CCDC80Q76M96 950 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 TIPARPQ7Z3E1 657 aaKnown RBP2.97□□□□□ -1.93
CALD1-224ENST00000498254 LRRC49Q8IUZ0 686 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 KRT222Q8N1A0 295 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 BHLHE23Q8NDY6 225 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 NPRL2Q8WTW4 380 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 TAF15Q92804 592 aaKnown RBP eCLIP2.97□□□□□ -1.93
CALD1-224ENST00000498254 TUBGCP3Q96CW5 907 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 PELI1Q96FA3 418 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 SH3YL1Q96HL8 342 aaPredicted RBP2.97□□□□□ -1.93
CALD1-224ENST00000498254 C12orf66Q96MD2 445 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 TCEANC2Q96MN5 208 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 AMDHD1Q96NU7 426 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 OPRPNQ99935 248 aaPredicted RBP2.97□□□□□ -1.93
CALD1-224ENST00000498254 ATF6BQ99941 703 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms