RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SGCBQ16585 318 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 VPS26BQ4G0F5 336 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 CPTPQ5TA50 214 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 VWA1Q6PCB0 445 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 SPNS3Q6ZMD2 512 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 RNF165Q6ZSG1 346 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 BTLAQ7Z6A9 289 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 FNDC5Q8NAU1 212 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 FAM110BQ8TC76 370 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 TUBGCP3Q96CW5 907 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 MTERF3Q96E29 417 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 FAM120BQ96EK7 910 aaKnown RBP8.65□□□□□ -1.02
MSH5-218ENST00000494646 PGM2Q96G03 612 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 PKNOX2Q96KN3 472 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 ZFP3Q96NJ6 502 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 KLHDC3Q9BQ90 382 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 PIGQQ9BRB3 760 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 SFXN3Q9BWM7 321 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 OPN3Q9H1Y3 402 aaPredicted RBP8.65□□□□□ -1.02
MSH5-218ENST00000494646 SIRT3Q9NTG7 399 aaPredicted RBP8.65□□□□□ -1.02
MSH5-218ENST00000494646 ACSS1Q9NUB1 689 aaPredicted RBP8.65□□□□□ -1.02
MSH5-218ENST00000494646 ZCCHC3Q9NUD5 404 aaKnown RBP8.65□□□□□ -1.02
MSH5-218ENST00000494646 GIN1Q9NXP7 522 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 NTMQ9P121 344 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 ATP6V1HQ9UI12 483 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 ABCG2Q9UNQ0 655 aa8.65□□□□□ -1.02
MSH5-218ENST00000494646 NPIPA5A0A0B4J1W7 369 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 TTC36A6NLP5 189 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 NPIPA7E9PJI5 369 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 EIF1AYO14602 144 aaKnown RBP8.64□□□□□ -1.03
MSH5-218ENST00000494646 CASKO14936 926 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 SCAMP2O15127 329 aaKnown RBP8.64□□□□□ -1.03
MSH5-218ENST00000494646 CFLARO15519 480 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 CTIFO43310 598 aaKnown RBP8.64□□□□□ -1.03
MSH5-218ENST00000494646 TYROBPO43914 113 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 TNFRSF21O75509 655 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 C6orf47O95873 294 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 IFI6P09912 130 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 NPIPA8P0DM63 369 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 HPGDP15428 266 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 CD1EP15812 388 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 TBXA2RP21731 343 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 DNASE1P24855 282 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 MAPK1P28482 360 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 ETV4P43268 484 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 KIR2DL2P43627 348 aaPredicted RBP8.64□□□□□ -1.03
MSH5-218ENST00000494646 CCT3P49368 545 aaKnown RBP8.64□□□□□ -1.03
MSH5-218ENST00000494646 PRIM2P49643 509 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 DIO3P55073 304 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 RPS3AP61247 264 aaKnown RBP8.64□□□□□ -1.03
MSH5-218ENST00000494646 GANABQ14697 944 aaKnown RBP8.64□□□□□ -1.03
MSH5-218ENST00000494646 PON3Q15166 354 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 PGS1Q32NB8 556 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 GLYR1Q49A26 553 aaPredicted RBP8.64□□□□□ -1.03
MSH5-218ENST00000494646 ATP6AP1LQ52LC2 224 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 XKR7Q5GH72 579 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 OR2A2Q6IF42 318 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 MFSD12Q6NUT3 480 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 WDR93Q6P2C0 686 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 EMBQ6PCB8 327 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 LRIG3Q6UXM1 1119 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 COX18Q8N8Q8 333 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 ZNF610Q8N9Z0 462 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 OR6Y1Q8NGX8 325 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 PPP1R14CQ8TAE6 165 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 FNDC9Q8TBE3 224 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 HOXB13Q92826 284 aaPredicted RBP8.64□□□□□ -1.03
MSH5-218ENST00000494646 CDS1Q92903 461 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 CAVIN3Q969G5 261 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 ZNF764Q96H86 408 aaPredicted RBP8.64□□□□□ -1.03
MSH5-218ENST00000494646 MS4A4EQ96PG1 132 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 PARD6BQ9BYG5 372 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 PRRG4Q9BZD6 226 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 ACBD3Q9H3P7 528 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 CENPHQ9H3R5 247 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 PIGMQ9H3S5 423 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 CXorf36Q9H7Y0 433 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 NDRG3Q9UGV2 375 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 CLEC4AQ9UMR7 237 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 AP4B1Q9Y6B7 739 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 KCNE3Q9Y6H6 103 aa8.64□□□□□ -1.03
MSH5-218ENST00000494646 NIPBLQ6KC79 2804 aaeCLIP8.64□□□□□ -1.03
MSH5-218ENST00000494646 FREM1Q5H8C1 2179 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 IGLV3-32A0A0A0MS00 114 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 SH3D21A4FU49 640 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 ALG1L2C9J202 215 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 LINC01387J3KSC0 135 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 SCDO00767 359 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 RGS16O15492 202 aaPredicted RBP8.63□□□□□ -1.03
MSH5-218ENST00000494646 DIAPH2O60879 1101 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 HSPA4LO95757 839 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 G6PDP11413 515 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 SERPINB5P36952 375 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 HPCAL1P37235 193 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 EIF1AXP47813 144 aaKnown RBP8.63□□□□□ -1.03
MSH5-218ENST00000494646 KCNJ5P48544 419 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 EEF1A1P68104 462 aaKnown RBP8.63□□□□□ -1.03
MSH5-218ENST00000494646 POU6F2P78424 691 aaPredicted RBP8.63□□□□□ -1.03
MSH5-218ENST00000494646 SORDQ00796 357 aa8.63□□□□□ -1.03
MSH5-218ENST00000494646 TP53BP2Q13625 1128 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms