RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	ERCC1	P07992	297 aa	Predicted RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	SAG	P10523	405 aa	Predicted RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	ANPEP	P15144	967 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	NAGA	P17050	411 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	SERPINB1	P30740	379 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	BUD31	P41223	144 aa	Predicted RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	KHK	P50053	298 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	GNG11	P61952	73 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CAV1	Q03135	178 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	DUSP2	Q05923	314 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CD69	Q07108	199 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	MGAT5	Q09328	741 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	PLCXD2	Q0VAA5	305 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CRYM	Q14894	314 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	C18orf21	Q32NC0	220 aa	Predicted RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	KLHL22	Q53GT1	634 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	OXLD1	Q5BKU9	147 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	ZNF628	Q5EBL2	1059 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	DEFB121	Q5J5C9	76 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CDKL4	Q5MAI5	379 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	C6orf163	Q5TEZ5	329 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	DCAF12L2	Q5VW00	463 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	KLC3	Q6P597	504 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	SPATA19	Q7Z5L4	167 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CCDC91	Q7Z6B0	441 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	GALNT10	Q86SR1	603 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	ADAMTSL2	Q86TH1	951 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	GGN	Q86UU5	652 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	P2RY8	Q86VZ1	359 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	THOC6	Q86W42	341 aa	Known RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	TUSC5	Q8IXB3	177 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CNPY4	Q8N129	248 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	BCL6B	Q8N143	479 aa	Predicted RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	OR10D3	Q8NH80	312 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	UBASH3B	Q8TF42	649 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	NEU4	Q8WWR8	484 aa	Predicted RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	FBXL8	Q96CD0	374 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	TMCO6	Q96DC7	493 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CERS2	Q96G23	380 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CFAP36	Q96G28	342 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	MS4A14	Q96JA4	679 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	SIGLEC10	Q96LC7	697 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	ZNF48	Q96MX3	618 aa	Predicted RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	LYST	Q99698	3801 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	SYT3	Q9BQG1	590 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	DDX47	Q9H0S4	455 aa	Known RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	NXF5	Q9H1B4	397 aa	Known RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	OR10A5	Q9H207	317 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	DSN1	Q9H410	356 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	C7orf69	Q9H7B7	122 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	PELI2	Q9HAT8	420 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	LYRM4	Q9HD34	91 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	TAS2R16	Q9NYV7	291 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	GPRC5B	Q9NZH0	403 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	MCM8	Q9UJA3	840 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	SNX12	Q9UMY4	172 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	ANGPTL3	Q9Y5C1	460 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CSMD3	Q7Z407	3707 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CCDC189	A1A4V9	331 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	FAM181B	A6NEQ2	426 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602		B9A039	149 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	ATP6V1G2-DDX39B	F2Z307	99 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602		J3QLI3	93 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	DNALI1	O14645	258 aa	Predicted RBP	4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	WNT9B	O14905	357 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	RAD51D	O75771	328 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	SLITRK5	O94991	958 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	MPZL1	O95297	269 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	OPN1LW	P04000	364 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	OPN1MW	P04001	364 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	CRYBA1	P05813	215 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	GSTA2	P09210	222 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	C1GALT1C1L	P0DN25	315 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	OPN1MW2	P0DN77	364 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	OPN1MW3	P0DN78	364 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	STMN1	P16949	149 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	ZNF17	P17021	662 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	GRK2	P25098	689 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	GABRB3	P28472	473 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	CRABP2	P29373	138 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	SPR	P35270	261 aa	Predicted RBP	4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	SERPINF1	P36955	418 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	ELK3	P41970	407 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	GPR6	P46095	362 aa	Predicted RBP	4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	PPOX	P50336	477 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	CDKN2D	P55273	166 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	ATP6V0D1	P61421	351 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	CDKL1	Q00532	357 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	MYBPC1	Q00872	1141 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	IL1RL1	Q01638	556 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	DHX9	Q08211	1270 aa	Known RBP	4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	SLAMF1	Q13291	335 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	FRG1	Q14331	258 aa	Known RBP	4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	SLMAP	Q14BN4	828 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	PPP1R3A	Q16821	1122 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	AP5B1	Q2VPB7	878 aa		4.67	□□□□□ -1.66
SEC13-219	ENST00000492602	TMEM35A	Q53FP2	167 aa		4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms