RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ASIC5Q9NY37 505 aa28.33■■■□□ 2.13
LDB1-204ENST00000490751 NOP53Q9NZM5 478 aaKnown RBP28.33■■■□□ 2.13
LDB1-204ENST00000490751 ANKHD1Q8IWZ3 2542 aaKnown RBP28.33■■■□□ 2.13
LDB1-204ENST00000490751 NUP214P35658 2090 aaPredicted RBP28.33■■■□□ 2.13
LDB1-204ENST00000490751 H3BML4 177 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 LINC01387J3KSC0 135 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 NDUFB5O43674 189 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 TGM6O95932 706 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 MYZAPP0CAP1 466 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 BGNP21810 368 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 SLC1A6P48664 564 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 TP53BP2Q13625 1128 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 SPDYE7PQ495Y7 208 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 GLYR1Q49A26 553 aaPredicted RBP28.32■■■□□ 2.12
LDB1-204ENST00000490751 FLYWCH1Q4VC44 716 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 P4HA3Q7Z4N8 544 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 OR56A1Q8NGH5 318 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 CDS1Q92903 461 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 PGM2Q96G03 612 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 SORT1Q99523 831 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 DUSP26Q9BV47 211 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 BTBD2Q9BX70 525 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 AKTIPQ9H8T0 292 aa28.32■■■□□ 2.12
LDB1-204ENST00000490751 EPB41L3Q9Y2J2 1087 aaPredicted RBP28.32■■■□□ 2.12
LDB1-204ENST00000490751 H0YC42 278 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 SEC14L5O43304 696 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 LCN1P31025 176 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 TPD52P55327 224 aaPredicted RBP28.31■■■□□ 2.12
LDB1-204ENST00000490751 CLDN15P56746 228 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 CLDN8P56748 225 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 SMU1Q2TAY7 513 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 CDC73Q6P1J9 531 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 ACTRT3Q9BYD9 372 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 PIGUQ9H490 435 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 HHATLQ9HCP6 504 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 NEUROD4Q9HD90 331 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 UBQLN4Q9NRR5 601 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 VDAC3Q9Y277 283 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 CCDC168Q8NDH2 2452 aa28.31■■■□□ 2.12
LDB1-204ENST00000490751 SHISA8B8ZZ34 492 aa28.3■■■□□ 2.12
LDB1-204ENST00000490751 CFLARO15519 480 aa28.3■■■□□ 2.12
LDB1-204ENST00000490751 SNUPNO95149 360 aaKnown RBP28.3■■■□□ 2.12
LDB1-204ENST00000490751 RPL14P50914 215 aaKnown RBP28.3■■■□□ 2.12
LDB1-204ENST00000490751 SUCLG1P53597 346 aaKnown RBP28.3■■■□□ 2.12
LDB1-204ENST00000490751 C21orf58P58505 322 aa28.3■■■□□ 2.12
LDB1-204ENST00000490751 KIF18BQ86Y91 864 aa28.3■■■□□ 2.12
LDB1-204ENST00000490751 SFXN5Q8TD22 340 aa28.3■■■□□ 2.12
LDB1-204ENST00000490751 FAM222BQ8WU58 562 aa28.3■■■□□ 2.12
LDB1-204ENST00000490751 SMPDL3BQ92485 455 aa28.3■■■□□ 2.12
LDB1-204ENST00000490751 GIN1Q9NXP7 522 aa28.3■■■□□ 2.12
LDB1-204ENST00000490751 FAF1Q9UNN5 650 aaPredicted RBP28.3■■■□□ 2.12
LDB1-204ENST00000490751 AKAP9Q99996 3911 aa28.3■■■□□ 2.12
LDB1-204ENST00000490751 SLC22A20A6NK97 555 aa28.29■■■□□ 2.12
LDB1-204ENST00000490751 CTAG2O75638 210 aa28.29■■■□□ 2.12
LDB1-204ENST00000490751 HPGDP15428 266 aa28.29■■■□□ 2.12
LDB1-204ENST00000490751 CLDN20P56880 219 aa28.29■■■□□ 2.12
LDB1-204ENST00000490751 EEFSECP57772 596 aaKnown RBP28.29■■■□□ 2.12
LDB1-204ENST00000490751 PGS1Q32NB8 556 aa28.29■■■□□ 2.12
LDB1-204ENST00000490751 CAMKMTQ7Z624 323 aa28.29■■■□□ 2.12
LDB1-204ENST00000490751 LUZP2Q86TE4 346 aa28.29■■■□□ 2.12
LDB1-204ENST00000490751 PAIP2Q9BPZ3 127 aaKnown RBP28.29■■■□□ 2.12
LDB1-204ENST00000490751 GPATCH2Q9NW75 528 aa28.29■■■□□ 2.12
LDB1-204ENST00000490751 DNAJB12Q9NXW2 375 aaKnown RBP28.29■■■□□ 2.12
LDB1-204ENST00000490751 SCDO00767 359 aa28.28■■■□□ 2.12
LDB1-204ENST00000490751 KRT16P08779 473 aa28.28■■■□□ 2.12
LDB1-204ENST00000490751 SOAT1P35610 550 aa28.28■■■□□ 2.12
LDB1-204ENST00000490751 HBA1P69905 142 aa28.28■■■□□ 2.12
LDB1-204ENST00000490751 STX3Q13277 289 aa28.28■■■□□ 2.12
LDB1-204ENST00000490751 TMEM44Q2T9K0 475 aa28.28■■■□□ 2.12
LDB1-204ENST00000490751 OR5AK3PQ8NH89 298 aa28.28■■■□□ 2.12
LDB1-204ENST00000490751 ADAMTS15Q8TE58 950 aa28.28■■■□□ 2.12
LDB1-204ENST00000490751 MOAP1Q96BY2 351 aa28.28■■■□□ 2.12
LDB1-204ENST00000490751 GPATCH1Q9BRR8 931 aaKnown RBP28.28■■■□□ 2.12
LDB1-204ENST00000490751 RBM24Q9BX46 236 aaKnown RBP28.28■■■□□ 2.12
LDB1-204ENST00000490751 PINK1Q9BXM7 581 aa28.28■■■□□ 2.12
LDB1-204ENST00000490751 HAO1Q9UJM8 370 aa28.28■■■□□ 2.12
LDB1-204ENST00000490751 AP4B1Q9Y6B7 739 aa28.28■■■□□ 2.12
LDB1-204ENST00000490751 A0A1W2PNV4 684 aa28.27■■■□□ 2.12
LDB1-204ENST00000490751 TUBAL3A6NHL2 446 aa28.27■■■□□ 2.12
LDB1-204ENST00000490751 CPA2P48052 419 aa28.27■■■□□ 2.12
LDB1-204ENST00000490751 EEF1A1P68104 462 aaKnown RBP28.27■■■□□ 2.12
LDB1-204ENST00000490751 SORDQ00796 357 aa28.27■■■□□ 2.12
LDB1-204ENST00000490751 EEF1A1P5Q5VTE0 462 aa28.27■■■□□ 2.12
LDB1-204ENST00000490751 OR2A2Q6IF42 318 aa28.27■■■□□ 2.12
LDB1-204ENST00000490751 MISPQ8IVT2 679 aa28.27■■■□□ 2.12
LDB1-204ENST00000490751 KIRREL3Q8IZU9 778 aa28.27■■■□□ 2.12
LDB1-204ENST00000490751 ANKRD42Q8N9B4 389 aa28.27■■■□□ 2.12
LDB1-204ENST00000490751 FIG4Q92562 907 aa28.27■■■□□ 2.12
LDB1-204ENST00000490751 SH3YL1Q96HL8 342 aaPredicted RBP28.27■■■□□ 2.12
LDB1-204ENST00000490751 PIGMQ9H3S5 423 aa28.27■■■□□ 2.12
LDB1-204ENST00000490751 PACSIN3Q9UKS6 424 aa28.27■■■□□ 2.12
LDB1-204ENST00000490751 A0A087WZY1 265 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 TNFSF12-TNFSF13A0A0A6YY99 330 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 A0A1W2PQD3 144 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 TNFRSF21O75509 655 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 TNFSF13O75888 250 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 ZNF17P17021 662 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 ATP6V1C1P21283 382 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 CD226Q15762 336 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 DCST2Q5T1A1 773 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms