RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 TNFSF13O75888 250 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 SMNDC1O75940 238 aaKnown RBP eCLIP9.34□□□□□ -0.91
RBM39-236ENST00000490484 C6orf47O95873 294 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 SERPINE1P05121 402 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 HMGN2P05204 90 aaKnown RBP9.34□□□□□ -0.91
RBM39-236ENST00000490484 NGFRP08138 427 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 G6PDP11413 515 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 HPGDP15428 266 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 PRPS1L1P21108 318 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 TBXA2RP21731 343 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 SOAT1P35610 550 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 RNF144AP50876 292 aaPredicted RBP9.34□□□□□ -0.91
RBM39-236ENST00000490484 ART1P52961 327 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 CLDN15P56746 228 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 SIRPAP78324 504 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 POU6F2P78424 691 aaPredicted RBP9.34□□□□□ -0.91
RBM39-236ENST00000490484 PON3Q15166 354 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 TESK1Q15569 626 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 BCL2A1Q16548 175 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.34□□□□□ -0.91
RBM39-236ENST00000490484 CEP85LQ5SZL2 805 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 PPP4R4Q6NUP7 873 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 OR5AK3PQ8NH89 298 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 GOT1L1Q8NHS2 421 aaPredicted RBP9.34□□□□□ -0.91
RBM39-236ENST00000490484 LINC01560Q8TB33 94 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 FIG4Q92562 907 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 SH3YL1Q96HL8 342 aaPredicted RBP9.34□□□□□ -0.91
RBM39-236ENST00000490484 ZNF845Q96IR2 970 aaPredicted RBP9.34□□□□□ -0.91
RBM39-236ENST00000490484 PIGMQ9H3S5 423 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 CXorf36Q9H7Y0 433 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 NEUROD4Q9HD90 331 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 RASSF1Q9NS23 344 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 ATAD3AQ9NVI7 634 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 FBXO34Q9NWN3 711 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 GIN1Q9NXP7 522 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 EIF3LQ9Y262 564 aaKnown RBP9.34□□□□□ -0.91
RBM39-236ENST00000490484 MED12LQ86YW9 2145 aa9.34□□□□□ -0.91
RBM39-236ENST00000490484 NPIPA5A0A0B4J1W7 369 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 NPIPA7E9PJI5 369 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 LINC01387J3KSC0 135 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 SCDO00767 359 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 CFLARO15519 480 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 NPIPA8P0DM63 369 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 ZNF17P17021 662 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 BGNP21810 368 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 CCT3P49368 545 aaKnown RBP9.33□□□□□ -0.92
RBM39-236ENST00000490484 ZNF41P51814 821 aaPredicted RBP9.33□□□□□ -0.92
RBM39-236ENST00000490484 DIO3P55073 304 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 EEFSECP57772 596 aaKnown RBP9.33□□□□□ -0.92
RBM39-236ENST00000490484 ABCE1P61221 599 aaKnown RBP9.33□□□□□ -0.92
RBM39-236ENST00000490484 RPS26P62854 115 aaKnown RBP9.33□□□□□ -0.92
RBM39-236ENST00000490484 POU4F3Q15319 338 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 CD226Q15762 336 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 EXOSC6Q5RKV6 272 aaKnown RBP9.33□□□□□ -0.92
RBM39-236ENST00000490484 OR2A2Q6IF42 318 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 CDC73Q6P1J9 531 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 VWA1Q6PCB0 445 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 ZCCHC12Q6PEW1 402 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 GGNQ86UU5 652 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 CDC20BQ86Y33 519 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 OR56A1Q8NGH5 318 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 FNDC9Q8TBE3 224 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 FAM110BQ8TC76 370 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 OR5P2Q8WZ92 322 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 STACQ99469 402 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 PRPF18Q99633 342 aaKnown RBP9.33□□□□□ -0.92
RBM39-236ENST00000490484 BTBD2Q9BX70 525 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 LIME1Q9H400 295 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 TMEM185BQ9H7F4 350 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 SSU72Q9NP77 194 aaKnown RBP9.33□□□□□ -0.92
RBM39-236ENST00000490484 UBQLN4Q9NRR5 601 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 DUSP22Q9NRW4 184 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 MED17Q9NVC6 651 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 NOP53Q9NZM5 478 aaKnown RBP9.33□□□□□ -0.92
RBM39-236ENST00000490484 FAF1Q9UNN5 650 aaPredicted RBP9.33□□□□□ -0.92
RBM39-236ENST00000490484 AP4B1Q9Y6B7 739 aa9.33□□□□□ -0.92
RBM39-236ENST00000490484 SH3D21A4FU49 640 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 A8MXE2 369 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 EIF1AYO14602 144 aaKnown RBP9.32□□□□□ -0.92
RBM39-236ENST00000490484 TM9SF1O15321 606 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 BIRC5O15392 142 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 KRT16P08779 473 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 DHRS4L1P0CG22 281 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 EPXP11678 715 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 ATP6V1C1P21283 382 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 EIF1AXP47813 144 aaKnown RBP9.32□□□□□ -0.92
RBM39-236ENST00000490484 IST1P53990 364 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 RPS3AP61247 264 aaKnown RBP9.32□□□□□ -0.92
RBM39-236ENST00000490484 HBA1P69905 142 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 MAD2L1Q13257 205 aaPredicted RBP9.32□□□□□ -0.92
RBM39-236ENST00000490484 SGCBQ16585 318 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 TMEM44Q2T9K0 475 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 PGS1Q32NB8 556 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 PLPPR5Q32ZL2 321 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 LSM12Q3MHD2 195 aaKnown RBP9.32□□□□□ -0.92
RBM39-236ENST00000490484 GLYR1Q49A26 553 aaPredicted RBP9.32□□□□□ -0.92
RBM39-236ENST00000490484 DCST2Q5T1A1 773 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 SPNS3Q6ZMD2 512 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 MISPQ8IVT2 679 aa9.32□□□□□ -0.92
RBM39-236ENST00000490484 RIMKLAQ8IXN7 391 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms