RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 GIN1Q9NXP7 522 aa15.79■□□□□ 0.12
SEC13-218ENST00000490283 L3MBTL1Q9Y468 752 aa15.79■□□□□ 0.12
SEC13-218ENST00000490283 FREM3P0C091 2139 aa15.79■□□□□ 0.12
SEC13-218ENST00000490283 INTS1Q8N201 2190 aaKnown RBP15.78■□□□□ 0.12
SEC13-218ENST00000490283 A0A087WZY1 265 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 IGLV3-32A0A0A0MS00 114 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 H3BML4 177 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 H3BNH8 94 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 CPA2P48052 419 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 ZNF41P51814 821 aaPredicted RBP15.78■□□□□ 0.12
SEC13-218ENST00000490283 AGFG1P52594 562 aaKnown RBP15.78■□□□□ 0.12
SEC13-218ENST00000490283 DLX5P56178 289 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 B3GALT5-AS1P59052 145 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 RPS3AP61247 264 aaKnown RBP15.78■□□□□ 0.12
SEC13-218ENST00000490283 CAMKMTQ7Z624 323 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 ADGRE4PQ86SQ3 457 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 RIMKLAQ8IXN7 391 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 LRRC34Q8IZ02 419 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 GATSQ8NAP1 163 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 VPS37AQ8NEZ2 397 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 OR4C3Q8NH37 302 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 FAM110BQ8TC76 370 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 CDS1Q92903 461 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 INTS12Q96CB8 462 aaKnown RBP15.78■□□□□ 0.12
SEC13-218ENST00000490283 SORT1Q99523 831 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 SH3GL2Q99962 352 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 NUF2Q9BZD4 464 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 RTN4RQ9BZR6 473 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 HOXD1Q9GZZ0 328 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 NKIRAS1Q9NYS0 192 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 CLCF1Q9UBD9 225 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 HAO1Q9UJM8 370 aa15.78■□□□□ 0.12
SEC13-218ENST00000490283 TMEM120BA0PK00 339 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 OR2M5A3KFT3 312 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 SLC22A20A6NK97 555 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 B4DXG7 233 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 SEC14L5O43304 696 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 LBPP18428 481 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 BST1Q10588 318 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 MPP2Q14168 576 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 CCNJQ5T5M9 372 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 ATG16L1Q676U5 607 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 APOOLQ6UXV4 268 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 CDH24Q86UP0 819 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 ZZZ3Q8IYH5 903 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 GCNT2Q8N0V5 402 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 OR5M1Q8NGP8 315 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 OR5AK3PQ8NH89 298 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 MGARPQ8TDB4 240 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 SMPDL3BQ92485 455 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 PIGMQ9H3S5 423 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 VDAC3Q9Y277 283 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 ZNF337Q9Y3M9 751 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 AP4B1Q9Y6B7 739 aa15.77■□□□□ 0.12
SEC13-218ENST00000490283 HCFC1P51610 2035 aa15.77■□□□□ 0.11
SEC13-218ENST00000490283 ARHGAP21Q5T5U3 1957 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 A0A1W2PQD3 144 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 DUXAA6NLW8 204 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 RNASET2O00584 256 aaKnown RBP15.76■□□□□ 0.11
SEC13-218ENST00000490283 HCRTR2O43614 444 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 ZNF17P17021 662 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 CLNS1AP54105 237 aaKnown RBP15.76■□□□□ 0.11
SEC13-218ENST00000490283 KRTAP10-9P60411 292 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 HBA1P69905 142 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 DPY19L1Q2PZI1 675 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 FLYWCH1Q4VC44 716 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 EXOSC6Q5RKV6 272 aaKnown RBP15.76■□□□□ 0.11
SEC13-218ENST00000490283 DCST2Q5T1A1 773 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 ANXA8L1Q5VT79 327 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 OR4F3Q6IEY1 312 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 POMZP3Q6PJE2 187 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 OR4A15Q8NGL6 344 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 FAM222BQ8WU58 562 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 ZBTB8AQ96BR9 441 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 SH3YL1Q96HL8 342 aaPredicted RBP15.76■□□□□ 0.11
SEC13-218ENST00000490283 C20orf27Q9GZN8 174 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 MEAF6Q9HAF1 191 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 THAP1Q9NVV9 213 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 ITGB1BP2Q9UKP3 347 aa15.76■□□□□ 0.11
SEC13-218ENST00000490283 APCP25054 2843 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 RNF103-CHMP3A0A140T963 221 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 TUBAL3A6NHL2 446 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 TNFRSF21O75509 655 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 CRHP06850 196 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 ME2P23368 584 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 SORDQ00796 357 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 FOXF2Q12947 444 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 SNTB1Q13884 538 aaKnown RBP15.75■□□□□ 0.11
SEC13-218ENST00000490283 SGCBQ16585 318 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 MTERF4Q7Z6M4 381 aaKnown RBP15.75■□□□□ 0.11
SEC13-218ENST00000490283 ZAR1Q86SH2 424 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 LUZP2Q86TE4 346 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 WDR75Q8IWA0 830 aaKnown RBP15.75■□□□□ 0.11
SEC13-218ENST00000490283 OR8J2Q8NGG1 315 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 B4GALNT2Q8NHY0 566 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 RAB3IL1Q8TBN0 382 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 PHOSPHO1Q8TCT1 267 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 ACTRT2Q8TDY3 377 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 NUDT8Q8WV74 236 aa15.75■□□□□ 0.11
SEC13-218ENST00000490283 RBM24Q9BX46 236 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms