RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CLDN15P56746 228 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 HBA1P69905 142 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 FBXL19-AS1Q494R0 122 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 SPDYE7PQ495Y7 208 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 OR4F3Q6IEY1 312 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 ARSKQ6UWY0 536 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 GATSQ8NAP1 163 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 OR5AK3PQ8NH89 298 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 SFXN5Q8TD22 340 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 WNT2BQ93097 391 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 CHMP6Q96FZ7 201 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 ACTRT3Q9BYD9 372 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 NEUROD4Q9HD90 331 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 GIN1Q9NXP7 522 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 KCNE3Q9Y6H6 103 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 SHISA8B8ZZ34 492 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 H0YC42 278 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 CFLARO15519 480 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 HCRTR2O43614 444 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 NDUFB5O43674 189 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 ERLIN1O75477 346 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 RCBTB2O95199 551 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 PEPDP12955 493 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 POU3F2P20265 443 aaPredicted RBP22.57■■□□□ 1.2
HMGN1-217ENST00000489072 LCN1P31025 176 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 UQCRC1P31930 480 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 TPD52P55327 224 aaPredicted RBP22.57■■□□□ 1.2
HMGN1-217ENST00000489072 UBQLNLQ8IYU4 475 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 CLECL1Q8IZS7 167 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 MGARPQ8TDB4 240 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 RNASE6Q93091 150 aaKnown RBP22.57■■□□□ 1.2
HMGN1-217ENST00000489072 TLCD1Q96CP7 247 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 TM9SF2Q99805 663 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 ZNF559Q9BR84 538 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 MEAF6Q9HAF1 191 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 UBQLN4Q9NRR5 601 aa22.57■■□□□ 1.2
HMGN1-217ENST00000489072 HRNRQ86YZ3 2850 aaPredicted RBP22.57■■□□□ 1.2
HMGN1-217ENST00000489072 AKAP6Q13023 2319 aa22.56■■□□□ 1.2
HMGN1-217ENST00000489072 ANKRD28O15084 1053 aa22.56■■□□□ 1.2
HMGN1-217ENST00000489072 TGM6O95932 706 aa22.56■■□□□ 1.2
HMGN1-217ENST00000489072 IL18BPO95998 194 aa22.56■■□□□ 1.2
HMGN1-217ENST00000489072 OPRM1P35372 400 aa22.56■■□□□ 1.2
HMGN1-217ENST00000489072 SUCLG1P53597 346 aaKnown RBP22.56■■□□□ 1.2
HMGN1-217ENST00000489072 MAGOHP61326 146 aaKnown RBP22.56■■□□□ 1.2
HMGN1-217ENST00000489072 MYBPHQ13203 477 aa22.56■■□□□ 1.2
HMGN1-217ENST00000489072 TMEM44Q2T9K0 475 aa22.56■■□□□ 1.2
HMGN1-217ENST00000489072 GLYR1Q49A26 553 aaPredicted RBP22.56■■□□□ 1.2
HMGN1-217ENST00000489072 KIRREL3Q8IZU9 778 aa22.56■■□□□ 1.2
HMGN1-217ENST00000489072 INTS12Q96CB8 462 aaKnown RBP22.56■■□□□ 1.2
HMGN1-217ENST00000489072 KLHDC3Q9BQ90 382 aa22.56■■□□□ 1.2
HMGN1-217ENST00000489072 TMBIM4Q9HC24 238 aa22.56■■□□□ 1.2
HMGN1-217ENST00000489072 JKAMPQ9P055 326 aa22.56■■□□□ 1.2
HMGN1-217ENST00000489072 FAF1Q9UNN5 650 aaPredicted RBP22.56■■□□□ 1.2
HMGN1-217ENST00000489072 ENO4A6NNW6 628 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 LBPP18428 481 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 SOAT1P35610 550 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 CD226Q15762 336 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 GRAMD2AQ8IUY3 354 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 GCNT2Q8N0V5 402 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 CLEC4FQ8N1N0 589 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 ADAMTS15Q8TE58 950 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 MOAP1Q96BY2 351 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 ZFP3Q96NJ6 502 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 NPAS1Q99742 590 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 PIGQQ9BRB3 760 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 DPY30Q9C005 99 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 SLC24A3Q9HC58 644 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 VDAC3Q9Y277 283 aa22.55■■□□□ 1.2
HMGN1-217ENST00000489072 NPIPA5A0A0B4J1W7 369 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 EEF1E1-BLOC1S5C9J1V9 151 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 NPIPA7E9PJI5 369 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 H3BML4 177 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 SDHDO14521 159 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 EEF1E1O43324 174 aaKnown RBP22.54■■□□□ 1.2
HMGN1-217ENST00000489072 SCN2BO60939 215 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 SNNO75324 88 aaPredicted RBP22.54■■□□□ 1.2
HMGN1-217ENST00000489072 NPIPA8P0DM63 369 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 SLC18A1P54219 525 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 CLDN20P56880 219 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 PHC1P78364 1004 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 DCST2Q5T1A1 773 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 LRRC34Q8IZ02 419 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 MEIOBQ8N635 442 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 OR8J2Q8NGG1 315 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 GOT1L1Q8NHS2 421 aaPredicted RBP22.54■■□□□ 1.2
HMGN1-217ENST00000489072 OR7D2Q96RA2 312 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 SFXN3Q9BWM7 321 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 SERHL2Q9H4I8 314 aa22.54■■□□□ 1.2
HMGN1-217ENST00000489072 CELSR1Q9NYQ6 3014 aa22.53■■□□□ 1.2
HMGN1-217ENST00000489072 A0A1W2PQD3 144 aa22.53■■□□□ 1.2
HMGN1-217ENST00000489072 LINC01387J3KSC0 135 aa22.53■■□□□ 1.2
HMGN1-217ENST00000489072 RNASET2O00584 256 aaKnown RBP22.53■■□□□ 1.2
HMGN1-217ENST00000489072 SCDO00767 359 aa22.53■■□□□ 1.2
HMGN1-217ENST00000489072 SEC14L5O43304 696 aa22.53■■□□□ 1.2
HMGN1-217ENST00000489072 KRT16P08779 473 aa22.53■■□□□ 1.2
HMGN1-217ENST00000489072 ALDOCP09972 364 aaKnown RBP22.53■■□□□ 1.2
HMGN1-217ENST00000489072 CAPN3P20807 821 aa22.53■■□□□ 1.2
HMGN1-217ENST00000489072 RPS26P62854 115 aaKnown RBP22.53■■□□□ 1.2
HMGN1-217ENST00000489072 ZZZ3Q8IYH5 903 aa22.53■■□□□ 1.2
HMGN1-217ENST00000489072 OR5D16Q8NGK9 328 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms