RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 HMGN2P05204 90 aaKnown RBP20.74■□□□□ 0.91
COL9A3-213ENST00000489045 EPXP11678 715 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 TBXA2RP21731 343 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 ART1P52961 327 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 DIO3P55073 304 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 EEFSECP57772 596 aaKnown RBP20.74■□□□□ 0.91
COL9A3-213ENST00000489045 EEF1A1P68104 462 aaKnown RBP20.74■□□□□ 0.91
COL9A3-213ENST00000489045 LASP1Q14847 261 aaKnown RBP20.74■□□□□ 0.91
COL9A3-213ENST00000489045 CCNJQ5T5M9 372 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 CPTPQ5TA50 214 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 EEF1A1P5Q5VTE0 462 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 OR2A2Q6IF42 318 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 CDC20BQ86Y33 519 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 KRTCAP2Q8N6L1 136 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 FIG4Q92562 907 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 CHMP6Q96FZ7 201 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 PINK1Q9BXM7 581 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 PARD6BQ9BYG5 372 aa20.74■□□□□ 0.91
COL9A3-213ENST00000489045 ITPR3Q14573 2671 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 ABCA4P78363 2273 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 WDR91A4D1P6 747 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 RGS16O15492 202 aaPredicted RBP20.73■□□□□ 0.91
COL9A3-213ENST00000489045 ITM2AO43736 263 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 CRHP06850 196 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 IST1P53990 364 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 POU6F2P78424 691 aaPredicted RBP20.73■□□□□ 0.91
COL9A3-213ENST00000489045 TMEM44Q2T9K0 475 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 CNEP1R1Q8N9A8 125 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 OR5P2Q8WZ92 322 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 CDS1Q92903 461 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 BTBD2Q9BX70 525 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 CXorf36Q9H7Y0 433 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 ATAD3AQ9NVI7 634 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 AP4B1Q9Y6B7 739 aa20.73■□□□□ 0.91
COL9A3-213ENST00000489045 A8MXE2 369 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 ZNF500O60304 480 aaPredicted RBP20.72■□□□□ 0.91
COL9A3-213ENST00000489045 TNFRSF21O75509 655 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 C6orf47O95873 294 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 CD1EP15812 388 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 LCN1P31025 176 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 CPOXP36551 454 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 TP53BP2Q13625 1128 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 CHI3L2Q15782 390 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 VWA1Q6PCB0 445 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 PSMA8Q8TAA3 256 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 NINJ1Q92982 152 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 COQ8BQ96D53 544 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 ZNF845Q96IR2 970 aaPredicted RBP20.72■□□□□ 0.91
COL9A3-213ENST00000489045 STACQ99469 402 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 ZNF395Q9H8N7 513 aaPredicted RBP20.72■□□□□ 0.91
COL9A3-213ENST00000489045 HHATLQ9HCP6 504 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 UBQLN4Q9NRR5 601 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 DUSP22Q9NRW4 184 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 ST6GALNAC2Q9UJ37 374 aa20.72■□□□□ 0.91
COL9A3-213ENST00000489045 EIF3LQ9Y262 564 aaKnown RBP20.72■□□□□ 0.91
COL9A3-213ENST00000489045 SCDO00767 359 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 SMNDC1O75940 238 aaKnown RBP eCLIP20.71■□□□□ 0.912e-6■□□□□ 8
COL9A3-213ENST00000489045 SERPINE1P05121 402 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 G6PDP11413 515 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 HPGDP15428 266 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 ZNF17P17021 662 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 PRPS1L1P21108 318 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 CCT3P49368 545 aaKnown RBP20.71■□□□□ 0.91
COL9A3-213ENST00000489045 RPS3AP61247 264 aaKnown RBP20.71■□□□□ 0.91
COL9A3-213ENST00000489045 PON3Q15166 354 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 PDCD2Q16342 344 aaPredicted RBP20.71■□□□□ 0.91
COL9A3-213ENST00000489045 SPDYE7PQ495Y7 208 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 FBXW10Q5XX13 1052 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 CDC73Q6P1J9 531 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 GGNQ86UU5 652 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 RIMKLAQ8IXN7 391 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 NATD1Q8N6N6 113 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 METTL25Q8N6Q8 603 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 ZNF781Q8N8C0 355 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 OR56A1Q8NGH5 318 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 FNDC9Q8TBE3 224 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 STARD4Q96DR4 205 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 SH3YL1Q96HL8 342 aaPredicted RBP20.71■□□□□ 0.91
COL9A3-213ENST00000489045 PRPF18Q99633 342 aaKnown RBP20.71■□□□□ 0.91
COL9A3-213ENST00000489045 PIGUQ9H490 435 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 SSU72Q9NP77 194 aaKnown RBP20.71■□□□□ 0.91
COL9A3-213ENST00000489045 ZNF175Q9Y473 711 aa20.71■□□□□ 0.91
COL9A3-213ENST00000489045 MAP1AP78559 2803 aaPredicted RBP20.71■□□□□ 0.91
COL9A3-213ENST00000489045 A0A087WZY1 265 aa20.7■□□□□ 0.9
COL9A3-213ENST00000489045 MSTNO14793 375 aa20.7■□□□□ 0.9
COL9A3-213ENST00000489045 SIRPAP78324 504 aa20.7■□□□□ 0.9
COL9A3-213ENST00000489045 MAD2L1Q13257 205 aaPredicted RBP20.7■□□□□ 0.9
COL9A3-213ENST00000489045 CD226Q15762 336 aa20.7■□□□□ 0.9
COL9A3-213ENST00000489045 LSM12Q3MHD2 195 aaKnown RBP20.7■□□□□ 0.9
COL9A3-213ENST00000489045 PPP1R36Q96LQ0 422 aa20.7■□□□□ 0.9
COL9A3-213ENST00000489045 NPAS1Q99742 590 aa20.7■□□□□ 0.9
COL9A3-213ENST00000489045 DUSP26Q9BV47 211 aa20.7■□□□□ 0.9
COL9A3-213ENST00000489045 ACTRT3Q9BYD9 372 aa20.7■□□□□ 0.9
COL9A3-213ENST00000489045 BHLHE41Q9C0J9 482 aaPredicted RBP20.7■□□□□ 0.9
COL9A3-213ENST00000489045 RNF122Q9H9V4 155 aa20.7■□□□□ 0.9
COL9A3-213ENST00000489045 NEUROD4Q9HD90 331 aa20.7■□□□□ 0.9
COL9A3-213ENST00000489045 CCM2LQ9NUG4 571 aaPredicted RBP20.7■□□□□ 0.9
COL9A3-213ENST00000489045 GIN1Q9NXP7 522 aa20.7■□□□□ 0.9
COL9A3-213ENST00000489045 A0A1W2PQD3 144 aa20.69■□□□□ 0.9
COL9A3-213ENST00000489045 SH3D21A4FU49 640 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms