RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 RSL1D1O76021 490 aaKnown RBP11.05□□□□□ -0.64
TTC3-221ENST00000488522 SOX30O94993 753 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 LINC00032P0C843 101 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 DPP4P27487 766 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 PCSK6P29122 969 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 MDH1P40925 334 aaKnown RBP11.05□□□□□ -0.64
TTC3-221ENST00000488522 PTH2RP49190 550 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 GANABQ14697 944 aaKnown RBP11.05□□□□□ -0.64
TTC3-221ENST00000488522 LTB4RQ15722 352 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 PDCD2Q16342 344 aaPredicted RBP11.05□□□□□ -0.64
TTC3-221ENST00000488522 SPIN4Q56A73 249 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 SPDYAQ5MJ70 313 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 NPSR1Q6W5P4 371 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 ADCY4Q8NFM4 1077 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 KLHL29Q96CT2 875 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 PIK3IP1Q96FE7 263 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 PERPQ96FX8 193 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 SLC39A3Q9BRY0 314 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 FAIM2Q9BWQ8 316 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 TUBB1Q9H4B7 451 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 PNPOQ9NVS9 261 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 DKKL1Q9UK85 242 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 PTGDR2Q9Y5Y4 395 aa11.05□□□□□ -0.64
TTC3-221ENST00000488522 CHD3Q12873 2000 aaKnown RBP11.04□□□□□ -0.64
TTC3-221ENST00000488522 PLOD3O60568 738 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 REM1O75628 298 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 SMNDC1O75940 238 aaKnown RBP eCLIP11.04□□□□□ -0.64
TTC3-221ENST00000488522 KITP10721 976 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 POU2F1P14859 743 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 EEFSECP57772 596 aaKnown RBP11.04□□□□□ -0.64
TTC3-221ENST00000488522 MRPS22P82650 360 aaKnown RBP11.04□□□□□ -0.64
TTC3-221ENST00000488522 MRPS35P82673 323 aaKnown RBP11.04□□□□□ -0.64
TTC3-221ENST00000488522 PPP2R2BQ00005 443 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 KRTAP1-1Q07627 177 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 CAPRIN1Q14444 709 aaKnown RBP11.04□□□□□ -0.64
TTC3-221ENST00000488522 C22orf34Q6ZV56 151 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 P4HA3Q7Z4N8 544 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 SAMD14Q8IZD0 417 aaPredicted RBP11.04□□□□□ -0.64
TTC3-221ENST00000488522 MEIOBQ8N635 442 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 PIWIL2Q8TC59 973 aaKnown RBP11.04□□□□□ -0.64
TTC3-221ENST00000488522 FIG4Q92562 907 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 ADOQ96SZ5 270 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 KCNK17Q96T54 332 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 OPN3Q9H1Y3 402 aaPredicted RBP11.04□□□□□ -0.64
TTC3-221ENST00000488522 UBTD1Q9HAC8 227 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 SLCO1B3Q9NPD5 702 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 ZNF780BQ9Y6R6 833 aa11.04□□□□□ -0.64
TTC3-221ENST00000488522 TRPC5OSA6NMA1 111 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 HDAC3O15379 428 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 CNOT4O95628 575 aaKnown RBP11.03□□□□□ -0.64
TTC3-221ENST00000488522 JUNP05412 331 aaKnown RBP11.03□□□□□ -0.64
TTC3-221ENST00000488522 PPP3CBP16298 524 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 PRPH2P23942 346 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 CORO7P57737 925 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 BTKQ06187 659 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 ACSM2AQ08AH3 577 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 GLYR1Q49A26 553 aaPredicted RBP11.03□□□□□ -0.64
TTC3-221ENST00000488522 XKR7Q5GH72 579 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 BEX5Q5H9J7 111 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 ACSM2BQ68CK6 577 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 LARP4Q71RC2 724 aaKnown RBP eCLIP11.03□□□□□ -0.64
TTC3-221ENST00000488522 WDR75Q8IWA0 830 aaKnown RBP11.03□□□□□ -0.64
TTC3-221ENST00000488522 C1orf52Q8N6N3 182 aaKnown RBP11.03□□□□□ -0.64
TTC3-221ENST00000488522 METTL25Q8N6Q8 603 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 CNEP1R1Q8N9A8 125 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 OR2M3Q8NG83 312 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 OR2T11Q8NH01 316 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 APIPQ96GX9 242 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 ZNF845Q96IR2 970 aaPredicted RBP11.03□□□□□ -0.64
TTC3-221ENST00000488522 PPP1R36Q96LQ0 422 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 PPP3R2Q96LZ3 170 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 PIGQQ9BRB3 760 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 TMEM204Q9BSN7 226 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 NUF2Q9BZD4 464 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 OR10A4Q9H209 315 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 CCDC134Q9H6E4 229 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 MCM8Q9UJA3 840 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 UTS2RQ9UKP6 389 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 ABCG2Q9UNQ0 655 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 CCL27Q9Y4X3 112 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 ANK2Q01484 3957 aa11.03□□□□□ -0.64
TTC3-221ENST00000488522 ABCA1O95477 2261 aa11.02□□□□□ -0.64
TTC3-221ENST00000488522 NPIPB8E9PQR5 432 aa11.02□□□□□ -0.65
TTC3-221ENST00000488522 SMAD7O15105 426 aaKnown RBP11.02□□□□□ -0.65
TTC3-221ENST00000488522 LSM1O15116 133 aaKnown RBP11.02□□□□□ -0.65
TTC3-221ENST00000488522 KLF4O43474 513 aa11.02□□□□□ -0.65
TTC3-221ENST00000488522 PCDH7O60245 1069 aa11.02□□□□□ -0.65
TTC3-221ENST00000488522 FADS1O60427 444 aa11.02□□□□□ -0.65
TTC3-221ENST00000488522 EDF1O60869 148 aaKnown RBP11.02□□□□□ -0.65
TTC3-221ENST00000488522 SEC22BO75396 215 aa11.02□□□□□ -0.65
TTC3-221ENST00000488522 CRLF1O75462 422 aa11.02□□□□□ -0.65
TTC3-221ENST00000488522 THBDP07204 575 aa11.02□□□□□ -0.65
TTC3-221ENST00000488522 FCGR2AP12318 317 aa11.02□□□□□ -0.65
TTC3-221ENST00000488522 IL11P20809 199 aa11.02□□□□□ -0.65
TTC3-221ENST00000488522 IL12BP29460 328 aa11.02□□□□□ -0.65
TTC3-221ENST00000488522 EVI2BP34910 448 aa11.02□□□□□ -0.65
TTC3-221ENST00000488522 KRT20P35900 424 aa11.02□□□□□ -0.65
TTC3-221ENST00000488522 SUCLG1P53597 346 aaKnown RBP11.02□□□□□ -0.65
TTC3-221ENST00000488522 LSM11P83369 360 aaKnown RBP eCLIP11.02□□□□□ -0.65
TTC3-221ENST00000488522 PSG6Q00889 435 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms