RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SHISA8B8ZZ34 492 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 H3BML4 177 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 SEC14L5O43304 696 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 NDUFB5O43674 189 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 HPGDP15428 266 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 TBXA2RP21731 343 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 OPRM1P35372 400 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 WDR4P57081 412 aaKnown RBP16.04■□□□□ 0.16
ITGB1-215ENST00000488494 HBA1P69905 142 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 C17orf67Q0P5P2 114 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 FOXF2Q12947 444 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 BEND6Q5SZJ8 279 aaPredicted RBP16.04■□□□□ 0.16
ITGB1-215ENST00000488494 CDC73Q6P1J9 531 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 ARSKQ6UWY0 536 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 CLECL1Q8IZS7 167 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 GCNT2Q8N0V5 402 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 RNASE6Q93091 150 aaKnown RBP16.04■□□□□ 0.16
ITGB1-215ENST00000488494 WNT2BQ93097 391 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 MOAP1Q96BY2 351 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 TM9SF2Q99805 663 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 ACTRT3Q9BYD9 372 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 PIGUQ9H490 435 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 SLC24A3Q9HC58 644 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 GPATCH2Q9NW75 528 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 GIN1Q9NXP7 522 aa16.04■□□□□ 0.16
ITGB1-215ENST00000488494 ANKRD17O75179 2603 aaKnown RBP16.03■□□□□ 0.16
ITGB1-215ENST00000488494 SCDO00767 359 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 HCRTR2O43614 444 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 KRT16P08779 473 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 LCN1P31025 176 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 MAGOHP61326 146 aaKnown RBP16.03■□□□□ 0.16
ITGB1-215ENST00000488494 RPS26P62854 115 aaKnown RBP16.03■□□□□ 0.16
ITGB1-215ENST00000488494 CD226Q15762 336 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 BCL2A1Q16548 175 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 FBXL19-AS1Q494R0 122 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 DCST2Q5T1A1 773 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 OR4F3Q6IEY1 312 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 TMEM200AQ86VY9 491 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 MEIOBQ8N635 442 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 SMPDL3BQ92485 455 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 INTS12Q96CB8 462 aaKnown RBP16.03■□□□□ 0.16
ITGB1-215ENST00000488494 LRRC46Q96FV0 321 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 SH3YL1Q96HL8 342 aaPredicted RBP16.03■□□□□ 0.16
ITGB1-215ENST00000488494 ZFP3Q96NJ6 502 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 UCN2Q96RP3 112 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 PIGQQ9BRB3 760 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 SFXN3Q9BWM7 321 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 DPY30Q9C005 99 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 MEAF6Q9HAF1 191 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 UBQLN4Q9NRR5 601 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 MARCOQ9UEW3 520 aaPredicted RBP16.03■□□□□ 0.16
ITGB1-215ENST00000488494 VDAC3Q9Y277 283 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 ZNF337Q9Y3M9 751 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 AKAP9Q99996 3911 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 DOCK7Q96N67 2140 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 CELSR1Q9NYQ6 3014 aa16.03■□□□□ 0.16
ITGB1-215ENST00000488494 HRNRQ86YZ3 2850 aaPredicted RBP16.02■□□□□ 0.16
ITGB1-215ENST00000488494 NPIPA5A0A0B4J1W7 369 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 RNF103-CHMP3A0A140T963 221 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 NPIPA7E9PJI5 369 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 H0YC42 278 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 IL18BPO95998 194 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 NPIPA8P0DM63 369 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 PEPDP12955 493 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 LBPP18428 481 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 ATP6V1C1P21283 382 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 RNF144AP50876 292 aaPredicted RBP16.02■□□□□ 0.16
ITGB1-215ENST00000488494 TPD52P55327 224 aaPredicted RBP16.02■□□□□ 0.16
ITGB1-215ENST00000488494 CHMP1BQ7LBR1 199 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 ZZZ3Q8IYH5 903 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 CLEC4FQ8N1N0 589 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 OR5D16Q8NGK9 328 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 OR4A15Q8NGL6 344 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 GOT1L1Q8NHS2 421 aaPredicted RBP16.02■□□□□ 0.16
ITGB1-215ENST00000488494 ADAMTS15Q8TE58 950 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 NKIRAS1Q9NYS0 192 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 KCNE3Q9Y6H6 103 aa16.02■□□□□ 0.16
ITGB1-215ENST00000488494 SLC22A20A6NK97 555 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 SYT5O00445 386 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 RNASET2O00584 256 aaKnown RBP16.01■□□□□ 0.15
ITGB1-215ENST00000488494 SDHDO14521 159 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 SNNO75324 88 aaPredicted RBP16.01■□□□□ 0.15
ITGB1-215ENST00000488494 RCBTB2O95199 551 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 TGM6O95932 706 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 ZNF17P17021 662 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 KIR2DL3P43628 341 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 ZNF41P51814 821 aaPredicted RBP16.01■□□□□ 0.15
ITGB1-215ENST00000488494 CLDN20P56880 219 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 TMEM44Q2T9K0 475 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 GLYR1Q49A26 553 aaPredicted RBP16.01■□□□□ 0.15
ITGB1-215ENST00000488494 BHLHB9Q6PI77 547 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 P4HA3Q7Z4N8 544 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 CDH24Q86UP0 819 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 ANKRD46Q86W74 232 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 ZNF527Q8NB42 609 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 TLCD1Q96CP7 247 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 OR7D2Q96RA2 312 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 ACBD3Q9H3P7 528 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 SERHL2Q9H4I8 314 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 TMBIM4Q9HC24 238 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms