RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 EMP2P54851 167 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 NUP107P57740 925 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ESRRGP62508 458 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 IL5RAQ01344 420 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 COX10Q12887 443 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 PIN1Q13526 163 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF141Q15928 474 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.52□□□□□ -1.375e-6■■■□□ 15.4
SF3A3-206ENST00000487062 KCTD21Q4G0X4 260 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CT45A2Q5DJT8 189 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ENTPD8Q5MY95 495 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 RBM48Q5RL73 367 aaKnown RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 MRPL2Q5T653 305 aaKnown RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF691Q5VV52 312 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF385CQ66K41 422 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ANKRD34AQ69YU3 496 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 NPSR1Q6W5P4 371 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF550Q7Z398 422 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 B3GNT8Q7Z7M8 397 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 GRAMD2AQ8IUY3 354 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CMIPQ8IY22 773 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CLIP4Q8N3C7 705 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF614Q8N883 585 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 BCORP1Q8N888 145 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 BMPERQ8N8U9 685 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF527Q8NB42 609 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 AQP11Q8NBQ7 271 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 SLC38A9Q8NBW4 561 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 OR1N1Q8NGS0 311 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF721Q8TF20 911 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 HSPBAP1Q96EW2 488 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 LCORQ96JN0 433 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 LRFN5Q96NI6 719 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 MUS81Q96NY9 551 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CTRCQ99895 268 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF559Q9BR84 538 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ZPBPQ9BS86 351 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 RSPO3Q9BXY4 272 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 GABARAPL3Q9BY60 117 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 UCK2Q9BZX2 261 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 GRIP2Q9C0E4 1043 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 SLC26A1Q9H2B4 701 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 SOX17Q9H6I2 414 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 WDR54Q9H977 334 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 APMAPQ9HDC9 416 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 KRCC1Q9NPI7 259 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 SLC22A11Q9NSA0 550 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 FBXO34Q9NWN3 711 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 SLC39A1Q9NY26 324 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 TESQ9UGI8 421 aaKnown RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 BLOC1S6Q9UL45 172 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 DTX4Q9Y2E6 619 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 A0A087WXM4 84 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 NPIPA5A0A0B4J1W7 369 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 TRBV4-1A0A0J9YWV2 114 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 TRAPPC13A5PLN9 417 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 SAGE2PA6NJ88 616 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 CPSF4LA6NMK7 179 aaKnown RBP6.51□□□□□ -1.37
SF3A3-206ENST00000487062 NPIPA7E9PJI5 369 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 PEX12O00623 359 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 FRS3O43559 492 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 FOXD2O60548 495 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-206ENST00000487062 IL33O95760 270 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 CLIC3O95833 236 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 CLPTM1O96005 669 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 GASTP01350 101 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 NPIPA8P0DM63 369 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 CDK4P11802 303 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 HPGDP15428 266 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 GSTM3P21266 225 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 IL12BP29460 328 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 SLC5A2P31639 672 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 CLK3P49761 638 aaKnown RBP6.51□□□□□ -1.37
SF3A3-206ENST00000487062 FOXD4Q12950 439 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-206ENST00000487062 TARDBPQ13148 414 aaKnown RBP eCLIP6.51□□□□□ -1.37
SF3A3-206ENST00000487062 FGFBP1Q14512 234 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 EBPQ15125 230 aaKnown RBP6.51□□□□□ -1.37
SF3A3-206ENST00000487062 NPTX1Q15818 432 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 CSRP2Q16527 193 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 MAPK14Q16539 360 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 PDZK1Q5T2W1 519 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 DCAF12Q5T6F0 453 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 FAAH2Q6GMR7 532 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 PODNL1Q6PEZ8 512 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF730Q6ZMV8 503 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 ANKRD37Q7Z713 158 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 COMTD1Q86VU5 262 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 TSPYL5Q86VY4 417 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF440Q8IYI8 595 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 SLC34A3Q8N130 599 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 PARP8Q8N3A8 854 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 SUMF1Q8NBK3 374 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 C17orf47Q8NEP4 570 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 TSPAN14Q8NG11 270 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 OR4N2Q8NGD1 307 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 OR9Q2Q8NGE9 314 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 PIGXQ8TBF5 258 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 GNPDA2Q8TDQ7 276 aa6.51□□□□□ -1.37
SF3A3-206ENST00000487062 HDAC2Q92769 488 aaKnown RBP6.51□□□□□ -1.37
SF3A3-206ENST00000487062 DIO2Q92813 273 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms