RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 NAPAP54920 295 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 PSMD4P55036 377 aaKnown RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 ADARB1P78563 741 aaKnown RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 SRSF1Q07955 248 aaKnown RBP eCLIP3.73□□□□□ -1.81
VPS41-212ENST00000482217 MGAT3Q09327 533 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 BNIP2Q12982 314 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 CDH18Q13634 790 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 PKP1Q13835 747 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 SLC15A2Q16348 729 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 TNXAQ16473 311 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 DCAF4L1Q3SXM0 396 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 XKR6Q5GH73 641 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 ENTPD8Q5MY95 495 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 SLX4IPQ5VYV7 408 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 LIPJQ5W064 366 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 UGT3A1Q6NUS8 523 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 RGMBQ6NW40 437 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 H3F3CQ6NXT2 135 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 CD164L2Q6UWJ8 174 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 CD300LGQ6UXG3 332 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 ZNF771Q7L3S4 317 aaPredicted RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 DPY19L4Q7Z388 723 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 CCDC190Q86UF4 302 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 GPSM1Q86YR5 675 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 TMEM156Q8N614 296 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 CCDC185Q8N715 623 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 BMPERQ8N8U9 685 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 POC1AQ8NBT0 407 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 CCDC197Q8NCU1 140 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 OR4N2Q8NGD1 307 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 OR2L8Q8NGY9 312 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 OR52E5Q8NH55 327 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 U2AF1L4Q8WU68 220 aaKnown RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 SMPDL3BQ92485 455 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 ATOH1Q92858 354 aaPredicted RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 C10orf35Q96D05 121 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 ZC3HAV1LQ96H79 300 aaKnown RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 CXorf58Q96LI9 332 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 ZNF570Q96NI8 536 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 OPALINQ96PE5 141 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 DEFB118Q96PH6 123 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 NAPGQ99747 312 aaPredicted RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 PRMT1Q99873 361 aaKnown RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 PAPOLGQ9BWT3 736 aaKnown RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 MAP1LC3CQ9BXW4 147 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 DGCR6LQ9BY27 220 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 TM6SF1Q9BZW5 370 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 SRRQ9GZT4 340 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 UPF3AQ9H1J1 476 aaKnown RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 WDR54Q9H977 334 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 PNRC2Q9NPJ4 139 aaKnown RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 SIRT7Q9NRC8 400 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 NXT1Q9UKK6 140 aaKnown RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 FBXL3Q9UKT7 428 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 RAB23Q9ULC3 237 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 ABCG2Q9UNQ0 655 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 A3GALT2U3KPV4 340 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 PBRM1Q86U86 1689 aa3.73□□□□□ -1.81
VPS41-212ENST00000482217 LRPPRCP42704 1394 aaKnown RBP3.73□□□□□ -1.81
VPS41-212ENST00000482217 ATXN2Q99700 1313 aaKnown RBP3.72□□□□□ -1.81
VPS41-212ENST00000482217 A0A0G2JK05 382 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 TRBV11-1A0A0K0K1C0 115 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 SH3PXD2BA1X283 911 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ZNF840PA6NDX5 716 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 FAM157AC9JC47 383 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 TMEM189-UBE2V1I3L0A0 370 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 J3QR06 171 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 AQP9O43315 295 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 EMC8O43402 210 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 AIREO43918 545 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 HPRP00739 348 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 UNGP13051 313 aaPredicted RBP3.72□□□□□ -1.81
VPS41-212ENST00000482217 EPCAMP16422 314 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 TNNI1P19237 187 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 RAB4AP20338 218 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 HRH2P25021 359 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 CD82P27701 267 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 GTF2E2P29084 291 aaKnown RBP3.72□□□□□ -1.81
VPS41-212ENST00000482217 BDKRB2P30411 391 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 SSTR1P30872 391 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 COILP38432 576 aaPredicted RBP3.72□□□□□ -1.81
VPS41-212ENST00000482217 NPBWR2P48146 333 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ALDH3B2P48448 385 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 TGM4P49221 684 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 PLK1P53350 603 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 CEBPGP53567 150 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 PGGT1BP53609 377 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 HMGCS2P54868 508 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 UCNP55089 124 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 CLDN15P56746 228 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 SPCS3P61009 180 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ATP6V0D1P61421 351 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ERVS71-1P61550 626 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 IL9RQ01113 521 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 OC90Q02509 493 aaPredicted RBP3.72□□□□□ -1.81
VPS41-212ENST00000482217 UBE2V1Q13404 147 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 VAMP3Q15836 100 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 MEP1AQ16819 746 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 ZSWIM7Q19AV6 140 aa3.72□□□□□ -1.81
VPS41-212ENST00000482217 CCDC153Q494R4 210 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms