RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 FAM173AQ9BQD7 235 aa18.24■□□□□ 0.51
ACTB-210ENST00000477812 RSPO3Q9BXY4 272 aaPredicted RBP18.24■□□□□ 0.51
ACTB-210ENST00000477812 MTHFD2LQ9H903 347 aaPredicted RBP18.24■□□□□ 0.51
ACTB-210ENST00000477812 SUCOQ9UBS9 1254 aaKnown RBP18.24■□□□□ 0.51
ACTB-210ENST00000477812 KALRNO60229 2985 aa18.24■□□□□ 0.51
ACTB-210ENST00000477812 A0A0G2JPF8 293 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 TMEM247A6NEH6 219 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 PRORSD1PA6NEY8 169 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 HNRNPCL2B2RXH8 293 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 HNRNPCL3B7ZW38 293 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 HNRNPCL1O60812 293 aaKnown RBP18.23■□□□□ 0.51
ACTB-210ENST00000477812 SNX4O95219 450 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 HNRNPCL4P0DMR1 293 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 MXRA7P84157 204 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 PLAURQ03405 335 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 CD226Q15762 336 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 INAQ16352 499 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 PDZK1Q5T2W1 519 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 ERICH5Q6P6B1 374 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 HMGN2P46Q86SG4 172 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 MARCH3Q86UD3 253 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 ZFP62Q8NB50 900 aaPredicted RBP18.23■□□□□ 0.51
ACTB-210ENST00000477812 OR2T12Q8NG77 320 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 BBS10Q8TAM1 723 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 TMEM41AQ96HV5 264 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 DOHHQ9BU89 302 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 ALG2Q9H553 416 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 KLRF1Q9NZS2 232 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 LUZP4Q9P127 313 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 CD300AQ9UGN4 299 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 WIF1Q9Y5W5 379 aa18.23■□□□□ 0.51
ACTB-210ENST00000477812 SCDO00767 359 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 SNPHO15079 494 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 SCO2O43819 266 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 DNAJA2O60884 412 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 GLSO94925 669 aaPredicted RBP18.22■□□□□ 0.51
ACTB-210ENST00000477812 ETS2P15036 469 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 MEOX1P50221 254 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 CRYBA2P53672 197 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 KCNJ2P63252 427 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 VEZF1Q14119 521 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 INPP5JQ15735 1006 aaPredicted RBP18.22■□□□□ 0.51
ACTB-210ENST00000477812 FXNQ16595 210 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 BNC2Q6ZN30 1099 aaPredicted RBP18.22■□□□□ 0.51
ACTB-210ENST00000477812 SLC30A8Q8IWU4 369 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 MICU2Q8IYU8 434 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 TEX19Q8NA77 164 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 ZNF527Q8NB42 609 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 TAAR6Q96RI8 345 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 CDRT15Q96T59 188 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 TBL1XR1Q9BZK7 514 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 TUBA8Q9NY65 449 aaPredicted RBP18.22■□□□□ 0.51
ACTB-210ENST00000477812 ADA2Q9NZK5 511 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 ANGPT4Q9Y264 503 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 DTNAQ9Y4J8 743 aa18.22■□□□□ 0.51
ACTB-210ENST00000477812 GPC6Q9Y625 555 aaPredicted RBP18.22■□□□□ 0.51
ACTB-210ENST00000477812 CHD6Q8TD26 2715 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 IGLV3-32A0A0A0MS00 114 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 C2orf72A6NCS6 295 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 C5orf58C9J3I9 102 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 KLRC4-KLRK1H3BQV0 150 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 ANGPTL1O95841 491 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 HSD17B1P14061 328 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 AQP1P29972 269 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 PMP22Q01453 160 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 GABPB1Q06547 395 aaPredicted RBP18.21■□□□□ 0.51
ACTB-210ENST00000477812 CEACAM7Q14002 265 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 CCDC80Q76M96 950 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.21■□□□□ 0.51
ACTB-210ENST00000477812 IFNEQ86WN2 208 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 PTRH1Q86Y79 214 aaKnown RBP18.21■□□□□ 0.51
ACTB-210ENST00000477812 WDSUB1Q8N9V3 476 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 FAM71CQ8NEG0 241 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 PACSIN3Q9UKS6 424 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.21■□□□□ 0.51
ACTB-210ENST00000477812 NINQ8N4C6 2090 aa18.21■□□□□ 0.51
ACTB-210ENST00000477812 ELOVL7A1L3X0 281 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 SERINC4A6NH21 518 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 BCAS1O75363 584 aaPredicted RBP18.2■□□□□ 0.5
ACTB-210ENST00000477812 THBS1P07996 1170 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 HPGDP15428 266 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 ADH7P40394 386 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 RNF144AP50876 292 aaPredicted RBP18.2■□□□□ 0.5
ACTB-210ENST00000477812 FGFBP1Q14512 234 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 HYAL4Q2M3T9 481 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 SPATS1Q496A3 300 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 COLEC12Q5KU26 742 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 RNFT1Q5M7Z0 435 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 SAMD4BQ5PRF9 694 aaKnown RBP18.2■□□□□ 0.5
ACTB-210ENST00000477812 TIGD3Q6B0B8 471 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 PEX5LQ8IYB4 626 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 RNF148Q8N7C7 305 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 FADS6Q8N9I5 356 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 GATSQ8NAP1 163 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 SLC39A7Q92504 469 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 ZNF597Q96LX8 424 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 KCTD14Q9BQ13 255 aaPredicted RBP18.2■□□□□ 0.5
ACTB-210ENST00000477812 ZFP64Q9NPA5 681 aa18.2■□□□□ 0.5
ACTB-210ENST00000477812 PRPF19Q9UMS4 504 aaKnown RBP18.2■□□□□ 0.5
ACTB-210ENST00000477812 CHST2Q9Y4C5 530 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms