RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 ERVK-19Q9WJR5 959 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 EML6Q6ZMW3 1958 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 MRPS14O60783 128 aaKnown RBP11.18□□□□□ -0.62
PRPF39-203ENST00000477626 ALBP02768 609 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 GABRA3P34903 492 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 NUP107P57740 925 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 IL11RAQ14626 422 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 PTGES3Q15185 160 aaKnown RBP11.18□□□□□ -0.62
PRPF39-203ENST00000477626 LPAL2Q16609 132 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 C19orf48Q6RUI8 117 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 OVCH1Q7RTY7 1134 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 ANKRD37Q7Z713 158 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 KRT73Q86Y46 540 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 CMIPQ8IY22 773 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 NLGN4XQ8N0W4 816 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 CLDN22Q8N7P3 220 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 AQP11Q8NBQ7 271 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 OR1N1Q8NGS0 311 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 OR52J3Q8NH60 311 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 ADAMTS15Q8TE58 950 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 MUL1Q969V5 352 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 SENP5Q96HI0 755 aaPredicted RBP11.18□□□□□ -0.62
PRPF39-203ENST00000477626 KRT84Q9NSB2 600 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 MGAT4BQ9UQ53 548 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 WDR45Q9Y484 360 aa11.18□□□□□ -0.62
PRPF39-203ENST00000477626 UMODP07911 640 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 OSMP13725 252 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 LCN1P31025 176 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 SKP1P63208 163 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 POU6F2P78424 691 aaPredicted RBP11.17□□□□□ -0.62
PRPF39-203ENST00000477626 RNLSQ5VYX0 342 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 WDR54Q9H977 334 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 MEPEQ9NQ76 525 aaPredicted RBP11.17□□□□□ -0.62
PRPF39-203ENST00000477626 MRPS18AQ9NVS2 196 aaKnown RBP11.17□□□□□ -0.62
PRPF39-203ENST00000477626 TRPC4Q9UBN4 977 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 KLHL3Q9UH77 587 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 SRPK3Q9UPE1 567 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 OR6C76A6NM76 312 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 PRR33A8MZF0 331 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 CDC42EP2O14613 210 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 PTP4A3O75365 173 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 CYP7B1O75881 506 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 SLC13A2Q13183 592 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 SMN1Q16637 294 aaKnown RBP11.17□□□□□ -0.62
PRPF39-203ENST00000477626 GPAT3Q53EU6 434 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 LANCL3Q6ZV70 420 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 C8orf59Q8N0T1 100 aaPredicted RBP11.17□□□□□ -0.62
PRPF39-203ENST00000477626 C7orf57Q8NEG2 295 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 PROX1Q92786 737 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 COL26A1Q96A83 441 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 SLC46A1Q96NT5 459 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 OR6C1Q96RD1 312 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 TESQ9UGI8 421 aaKnown RBP11.17□□□□□ -0.62
PRPF39-203ENST00000477626 PSORS1C1Q9UIG5 152 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 IGKV1D-42A0A075B6H8 117 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 SYNDIG1LA6NDD5 238 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 C17orf105B2RV13 164 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 C5orf58C9J3I9 102 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 MVKQ03426 396 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 PRKCDQ05655 676 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 PMS2P3Q13401 168 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 ZC3H14Q6PJT7 736 aaKnown RBP11.17□□□□□ -0.62
PRPF39-203ENST00000477626 SLC16A12Q6ZSM3 486 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 MBOAT2Q6ZWT7 520 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 TOR1AIP2Q8NFQ8 470 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 OR4C3Q8NH37 302 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 LIPHQ8WWY8 451 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 AHCYL2Q96HN2 611 aaKnown RBP11.17□□□□□ -0.62
PRPF39-203ENST00000477626 DGAT2Q96PD7 388 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 IL20Q9NYY1 176 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 HRH3Q9Y5N1 445 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 R4GN57 208 aa11.17□□□□□ -0.62
PRPF39-203ENST00000477626 NPIPA5A0A0B4J1W7 369 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 NPIPA7E9PJI5 369 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 OIP5O43482 229 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 FADS1O60427 444 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 NPIPA8P0DM63 369 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 CDH2P19022 906 aaPredicted RBP11.16□□□□□ -0.62
PRPF39-203ENST00000477626 FBLP22087 321 aaKnown RBP11.16□□□□□ -0.62
PRPF39-203ENST00000477626 FPR3P25089 353 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 DCKP27707 260 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 ACY1Q03154 408 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 CD226Q15762 336 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 ZNF362Q5T0B9 420 aaPredicted RBP11.16□□□□□ -0.62
PRPF39-203ENST00000477626 ZNF485Q8NCK3 441 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 FAR1Q8WVX9 515 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 TUBA1CQ9BQE3 449 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 SH2D2AQ9NP31 389 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 LSM2Q9Y333 95 aaKnown RBP11.16□□□□□ -0.62
PRPF39-203ENST00000477626 A0A1W2PQD3 144 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 DLGAP3O95886 979 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 ZNF806P0C7X5 589 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 PTGDSP41222 190 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 NR1H2P55055 460 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 GP2P55259 537 aaKnown RBP11.16□□□□□ -0.62
PRPF39-203ENST00000477626 HOXC5Q00444 222 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 TMEM255BQ8WV15 326 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 HGDQ93099 445 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 WWTR1Q9GZV5 400 aa11.16□□□□□ -0.62
PRPF39-203ENST00000477626 ARRDC1-AS1Q9H2J1 176 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms