RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 A0A1W2PRB8 838 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 TCRBV21S2A2A0A5A6 115 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 SH3PXD2BA1X283 911 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 C5orf60A6NFR6 353 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ANKRD61A6NGH8 418 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 RFPL4AA6NLU0 287 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 MAGEB17A8MXT2 336 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 MYO1GB0I1T2 1018 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 RFPL4AL1F8VTS6 287 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 H3BQF6 201 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CCDC188H7C350 402 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 I3L1I5 382 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 TXNDC9O14530 226 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 GPAA1O43292 621 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 AQP9O43315 295 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 DPM1O60762 260 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 NME6O75414 186 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 VPS26AO75436 327 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 MED6O75586 246 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 DFFBO76075 338 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PDE9AO76083 593 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 SLCO2B1O94956 709 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 MOCS3O95396 460 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ATP6V1G2O95670 118 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CXCL14O95715 111 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 MBD3O95983 291 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 TNNC2P02585 160 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PGK2P07205 417 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 GUSBP08236 651 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 SRPRAP08240 638 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 FBP1P09467 338 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ZDHHC11BP0C7U3 371 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 FAM228BP0C875 321 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 TRIM49P0CI25 452 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 TRIM49CP0CI26 452 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 STAG3L1P0CL83 205 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 SAGP10523 405 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 MCF2P10911 925 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PSKH1P11801 424 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 NR2C1P13056 603 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 MAGP20916 626 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CYP2F1P24903 491 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 IL12BP29460 328 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CD80P33681 288 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PHBP35232 272 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PGM1P36871 562 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 GPX4P36969 197 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 HSPA9P38646 679 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 P2RY2P41231 377 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 FRKP42685 505 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 SLC1A2P43004 574 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 BTDP43251 543 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 OMPP47874 163 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 SLC6A12P48065 614 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ARRB1P49407 418 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 CSNK1EP49674 416 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 LIG4P49917 911 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 MEOX2P50222 304 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 RAB13P51153 203 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 BCAP31P51572 246 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 MAPK12P53778 367 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PKNOX1P55347 436 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 TAS2R38P59533 333 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 AP3S2P59780 193 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ST8SIA6P61647 398 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 RPL23AP62750 156 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 VSNL1P62760 191 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 RBX1P62877 108 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PSPHP78330 225 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ELF3P78545 371 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 CDK16Q00536 496 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 REEP5Q00765 189 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 FLI1Q01543 452 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 IFITM2Q01629 132 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 BST1Q10588 318 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 BAMBIQ13145 260 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 NAE1Q13564 534 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CAMK1Q14012 370 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 SMCO1Q147U7 214 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 IRF4Q15306 451 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 MED22Q15528 200 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ZNHIT3Q15649 155 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 FAM189A2Q15884 450 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 STX1AQ16623 288 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CA9Q16790 459 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 DUSP7Q16829 419 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 TRIM16LQ309B1 348 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 CNPY1Q3B7I2 92 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 SLC36A3Q495N2 470 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 LBHQ53QV2 105 aaPredicted RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 SPANXN2Q5MJ10 180 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 PHYHD1Q5SRE7 291 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ADAMTSL4-AS1Q5T5F5 129 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 ELP2Q6IA86 826 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 FRMPD2BQ6IN97 320 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 TCEAL6Q6IPX3 200 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 APOBEC3HQ6NTF7 200 aaKnown RBP2.23□□□□□ -2.05
XRN1-211ENST00000477237 PWWP2BQ6NUJ5 590 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 KLHL35Q6PF15 583 aa2.23□□□□□ -2.05
XRN1-211ENST00000477237 NCEH1Q6PIU2 408 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms