RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 BORAQ6PGQ7 559 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 FAM111BQ6SJ93 734 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 WASH2PQ6VEQ5 465 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF517Q6ZMY9 492 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-203ENST00000467558 TMEM150AQ86TG1 271 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 PRR22Q8IZ63 422 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 CYB561A3Q8NBI2 242 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 NAA11Q9BSU3 229 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-203ENST00000467558 PIGUQ9H490 435 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 SMURF1Q9HCE7 757 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 A4GALTQ9NPC4 353 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 EXTL2Q9UBQ6 330 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 SCN4AP35499 1836 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 TLCD2A6NGC4 264 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 J3KTA2 159 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 PRKYO43930 277 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 CER1O95813 267 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 CSTBP04080 98 aaKnown RBP12.92□□□□□ -0.34
BRAT1-203ENST00000467558 RAB40BQ12829 278 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 ERV3-1Q14264 604 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 EDAQ92838 391 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 OMA1Q96E52 524 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 MAP3K3Q99759 626 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 TNS1Q9HBL0 1735 aaKnown RBP12.92□□□□□ -0.34
BRAT1-203ENST00000467558 COL11A1P12107 1806 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-203ENST00000467558 SYT5O00445 386 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 BCAS1O75363 584 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-203ENST00000467558 CDK1P06493 297 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 HSD11B2P80365 405 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 SHFQ7M4L6 423 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 GALNTL5Q7Z4T8 443 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 SYNPOQ8N3V7 929 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF283Q8N7M2 679 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 WACQ9BTA9 647 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.92□□□□□ -0.34
BRAT1-203ENST00000467558 OR52D1Q9H346 318 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 TAS2R10Q9NYW0 307 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 SLC23A2Q9UGH3 650 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 TRIP12Q14669 1992 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-203ENST00000467558 ISPDA4D126 451 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 H3BMQ9 156 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 PLRG1O43660 514 aaKnown RBP12.91□□□□□ -0.34
BRAT1-203ENST00000467558 SYNGR4O95473 234 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 HCKP08631 526 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 SRFP11831 508 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 OTX2P32243 289 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 STARP49675 285 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 CHAF1BQ13112 559 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 SMAD4Q13485 552 aaKnown RBP12.91□□□□□ -0.34
BRAT1-203ENST00000467558 MRPL2Q5T653 305 aaKnown RBP12.91□□□□□ -0.34
BRAT1-203ENST00000467558 AGBL4Q5VU57 503 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 OLFML2AQ68BL7 652 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 SHISA6Q6ZSJ9 500 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 FAM217AQ8IXS0 508 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 IL17RCQ8NAC3 791 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 WDR20Q8TBZ3 569 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 DDIT4LQ96D03 193 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 MS4A6EQ96DS6 147 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 ELP4Q96EB1 424 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 COG8Q96MW5 612 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 CHMP1AQ9HD42 196 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-203ENST00000467558 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 IGLV3-16A0A075B6K0 115 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 OR5K3A6NET4 321 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 LINC01565O15544 149 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF432O94892 652 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 VNN2O95498 520 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 POLR2IP36954 125 aaKnown RBP12.91□□□□□ -0.34
BRAT1-203ENST00000467558 TSPAN31Q12999 210 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 OR1Q1Q15612 314 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 LRFN4Q6PJG9 635 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 TMEM17Q86X19 198 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 CENPSQ8N2Z9 138 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 OR8K3Q8NH51 312 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 NARS2Q96I59 477 aaKnown RBP12.91□□□□□ -0.34
BRAT1-203ENST00000467558 MOV10Q9HCE1 1003 aaKnown RBP12.91□□□□□ -0.34
BRAT1-203ENST00000467558 RGS9O75916 674 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-203ENST00000467558 ITGA5P08648 1049 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 SLC35E2P0CK97 266 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 STT3AP46977 705 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 EMX1Q04741 257 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-203ENST00000467558 SGCAQ16586 387 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 NHSL2Q5HYW2 709 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-203ENST00000467558 CCDC107Q8WV48 283 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 AASSQ9UDR5 926 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 IER3IP1Q9Y5U9 82 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 CD8B2A6NJW9 211 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF208O43345 1280 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 TFAP2AP05549 437 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 CD8BP10966 210 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 CHMP24386 653 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 KCNJ5P48544 419 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 DAPP51397 102 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 CCR5P51681 352 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 BMXP51813 675 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 RIDAP52758 137 aaKnown RBP12.91□□□□□ -0.34
BRAT1-203ENST00000467558 ZER1Q7Z7L7 766 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 OR51L1Q8NGJ5 315 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 NUDT8Q8WV74 236 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms