RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 MED12Q93074 2177 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 A0A1W2PRB8 838 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 TMEM233B4DJY2 109 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 H3BNH8 94 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 LSM1O15116 133 aaKnown RBP15.78■□□□□ 0.12
COL7A1-206ENST00000466591 PEX11AO75192 247 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 NKX2-2O95096 273 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 ATE1O95260 518 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 OXSR1O95747 527 aaPredicted RBP15.78■□□□□ 0.12
COL7A1-206ENST00000466591 HSPA4LO95757 839 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 HRGP04196 525 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 CHRNGP07510 517 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 ZNF17P17021 662 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 ALDH3A1P30838 453 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 POU6F2P78424 691 aaPredicted RBP15.78■□□□□ 0.12
COL7A1-206ENST00000466591 FOXD4Q12950 439 aaPredicted RBP15.78■□□□□ 0.12
COL7A1-206ENST00000466591 ZNF385BQ569K4 471 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 ARL13AQ5H913 290 aaPredicted RBP15.78■□□□□ 0.12
COL7A1-206ENST00000466591 CPTPQ5TA50 214 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 ZCCHC12Q6PEW1 402 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 Q6ZSR9 355 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 BTLAQ7Z6A9 289 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 STK32CQ86UX6 486 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 P3H2Q8IVL5 708 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 MISPQ8IVT2 679 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 FNDC5Q8NAU1 212 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 ZBTB8AQ96BR9 441 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 PIK3IP1Q96FE7 263 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 MECRQ9BV79 373 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 TMUB1Q9BVT8 246 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 RNF122Q9H9V4 155 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 UBQLN4Q9NRR5 601 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 TESMINQ9Y4I5 508 aa15.78■□□□□ 0.12
COL7A1-206ENST00000466591 CELSR1Q9NYQ6 3014 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 ALG1L2C9J202 215 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 NPIPB8E9PQR5 432 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 C16orf97H3BN30 126 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 SCAMP2O15127 329 aaKnown RBP15.77■□□□□ 0.12
COL7A1-206ENST00000466591 ARHGEF9O43307 516 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 SKAP2O75563 359 aaPredicted RBP15.77■□□□□ 0.12
COL7A1-206ENST00000466591 KCNK2O95069 426 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 SLU7O95391 586 aaKnown RBP15.77■□□□□ 0.12
COL7A1-206ENST00000466591 IGKV1D-16P01601 117 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 KRT16P08779 473 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 ACP2P11117 423 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 BCKDHAP12694 445 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 TBXA2RP21731 343 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 TP53BP2Q13625 1128 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 LASP1Q14847 261 aaKnown RBP15.77■□□□□ 0.12
COL7A1-206ENST00000466591 DUSP5Q16690 384 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 LSM12Q3MHD2 195 aaKnown RBP15.77■□□□□ 0.12
COL7A1-206ENST00000466591 MFSD12Q6NUT3 480 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 ZCCHC23Q6ZST2 131 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 FAM214BQ7L5A3 538 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 ZNF614Q8N883 585 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 SLC16A11Q8NCK7 471 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 PHOSPHO1Q8TCT1 267 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 ADAMTS15Q8TE58 950 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 C1orf50Q9BV19 199 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 BTBD2Q9BX70 525 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 RTN4RQ9BZR6 473 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 TMEM185BQ9H7F4 350 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 UBTD1Q9HAC8 227 aa15.77■□□□□ 0.12
COL7A1-206ENST00000466591 B4DXG7 233 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 TBX19O60806 448 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 OPN1LWP04000 364 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 SOAT1P35610 550 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 UGT2B10P36537 528 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.76■□□□□ 0.11
COL7A1-206ENST00000466591 CCNJQ5T5M9 372 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 GTF2IRD2BQ6EKJ0 949 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 RNF165Q6ZSG1 346 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 GTF2IRD2Q86UP8 949 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 METTL25Q8N6Q8 603 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 BANPQ8N9N5 519 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 ZNF610Q8N9Z0 462 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 OR56A1Q8NGH5 318 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 OR4C3Q8NH37 302 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 B4GALNT2Q8NHY0 566 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 TUBGCP3Q96CW5 907 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 C16orf58Q96GQ5 468 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 FCRL1Q96LA6 429 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 RNF145Q96MT1 663 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 WFIKKN1Q96NZ8 548 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 TUBB1Q9H4B7 451 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 PLEKHF2Q9H8W4 249 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 BEX4Q9NWD9 120 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-206ENST00000466591 MKS1Q9NXB0 559 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 CLEC4AQ9UMR7 237 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 HIVEP1P15822 2718 aa15.76■□□□□ 0.11
COL7A1-206ENST00000466591 C2CD3Q4AC94 2353 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 IGLV3-32A0A0A0MS00 114 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 GTPBP1O00178 669 aaKnown RBP15.75■□□□□ 0.11
COL7A1-206ENST00000466591 TNFSF11O14788 317 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 SMPD2O60906 423 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 LYPLA1O75608 230 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-206ENST00000466591 HMGN2P05204 90 aaKnown RBP15.75■□□□□ 0.11
COL7A1-206ENST00000466591 NGFRP08138 427 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 FGF4P08620 206 aa15.75■□□□□ 0.11
COL7A1-206ENST00000466591 CD8BP10966 210 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms