RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 EXOC1LA0A1B0GW35 172 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 OR2M5A3KFT3 312 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 H3BML4 177 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 LINC01387J3KSC0 135 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 EMC8O43402 210 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 KLF4O43474 513 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 COQ9O75208 318 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 URI1O94763 535 aaPredicted RBP8.71□□□□□ -1.02
USP39-212ENST00000465514 ENO1P06733 434 aaKnown RBP8.71□□□□□ -1.02
USP39-212ENST00000465514 THBDP07204 575 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 THBS1P07996 1170 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 SOD3P08294 240 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 DDCP20711 480 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 GCAP28676 217 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 ECHS1P30084 290 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 GSTM5P46439 218 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 KCNJ5P48544 419 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 PRKAA2P54646 552 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 PKNOX1P55347 436 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 CLDN20P56880 219 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 DEFA6Q01524 100 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 LCP2Q13094 533 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 GANABQ14697 944 aaKnown RBP8.71□□□□□ -1.02
USP39-212ENST00000465514 PON3Q15166 354 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 DECR1Q16698 335 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 HIST2H2BDQ6DRA6 164 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 TMEM107Q6UX40 140 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 MARCH3Q86UD3 253 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 SLC22A9Q8IVM8 553 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 MMGT1Q8N4V1 131 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 NOA1Q8NC60 698 aaKnown RBP8.71□□□□□ -1.02
USP39-212ENST00000465514 FNDC9Q8TBE3 224 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 CAVIN3Q969G5 261 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 L3HYPDHQ96EM0 354 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 C1GALT1C1Q96EU7 318 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 PLPPR2Q96GM1 343 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 RHNO1Q9BSD3 238 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 SHCBP1LQ9BZQ2 653 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 C12orf65Q9H3J6 166 aaKnown RBP8.71□□□□□ -1.02
USP39-212ENST00000465514 PTGES2Q9H7Z7 377 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 RNF122Q9H9V4 155 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 FAM120CQ9NX05 1096 aaKnown RBP8.71□□□□□ -1.02
USP39-212ENST00000465514 SIRT5Q9NXA8 310 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 GDF2Q9UK05 429 aaPredicted RBP8.71□□□□□ -1.02
USP39-212ENST00000465514 ABCG2Q9UNQ0 655 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 C19orf53Q9UNZ5 99 aaPredicted RBP8.71□□□□□ -1.02
USP39-212ENST00000465514 LIPT1Q9Y234 373 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 STK38LQ9Y2H1 464 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 ZNF175Q9Y473 711 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 MAGED1Q9Y5V3 778 aaPredicted RBP8.71□□□□□ -1.02
USP39-212ENST00000465514 SERTM1A2A2V5 107 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 FAM234BA2RU67 622 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 CCDC151A5D8V7 595 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 GOLGA8RI6L899 631 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 UPK1AO00322 258 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 GMFGO60234 142 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 LMX1BO60663 402 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 SLITRK5O94991 958 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 PSMG1O95456 288 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 IL33O95760 270 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 CD8BP10966 210 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 TBXA2RP21731 343 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 RFX3P48380 749 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 CLK3P49761 638 aaKnown RBP8.7□□□□□ -1.02
USP39-212ENST00000465514 FOXA1P55317 472 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 ZNF763Q0D2J5 394 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 FGFBP1Q14512 234 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 GUSBP1Q15486 140 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 WHAMMP3Q1A5X7 153 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 GLYR1Q49A26 553 aaPredicted RBP8.7□□□□□ -1.02
USP39-212ENST00000465514 FAM120AOSQ5T036 256 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 CYB5R2Q6BCY4 276 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 FAM71E1Q6IPT2 247 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 LCA5Q86VQ0 697 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 OR2L13Q8N349 312 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.7□□□□□ -1.02
USP39-212ENST00000465514 HS6ST2Q96MM7 605 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 TMEM204Q9BSN7 226 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 KLHL4Q9C0H6 718 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 GLIPR2Q9H4G4 154 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 GSTO2Q9H4Y5 243 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 CHODLQ9H9P2 273 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 Q9N2J8 555 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 MID1IP1Q9NPA3 183 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 MIEF1Q9NQG6 463 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 DDX18Q9NVP1 670 aaKnown RBP8.7□□□□□ -1.02
USP39-212ENST00000465514 TAS2R7Q9NYW3 318 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 MRTO4Q9UKD2 239 aaKnown RBP8.7□□□□□ -1.02
USP39-212ENST00000465514 GRID1Q9ULK0 1009 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 PROCRQ9UNN8 238 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 AP4B1Q9Y6B7 739 aa8.7□□□□□ -1.02
USP39-212ENST00000465514 VWFP04275 2813 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 GXYLT2A0PJZ3 443 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 SHISA8B8ZZ34 492 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 TCF21O43680 179 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 SSX4O60224 188 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 AQP8O94778 261 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 UTS2O95399 124 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 DANCRP0C864 163 aa8.69□□□□□ -1.02
USP39-212ENST00000465514 IGHV4-31P0DP07 118 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms