RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 ITM2AO43736 263 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 TNFSF13O75888 250 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 SERPINE1P05121 402 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 HMGN2P05204 90 aaKnown RBP23.33■■□□□ 1.33
U2AF1-206ENST00000464750 TBXA2RP21731 343 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 SUCLG1P53597 346 aaKnown RBP23.33■■□□□ 1.33
U2AF1-206ENST00000464750 DIO3P55073 304 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 EEFSECP57772 596 aaKnown RBP23.33■■□□□ 1.33
U2AF1-206ENST00000464750 EEF1A1P68104 462 aaKnown RBP23.33■■□□□ 1.33
U2AF1-206ENST00000464750 CHI3L2Q15782 390 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 CCNJQ5T5M9 372 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 EEF1A1P5Q5VTE0 462 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 LINC01560Q8TB33 94 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 NUDT8Q8WV74 236 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 PINK1Q9BXM7 581 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 FBXO34Q9NWN3 711 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 EIF3LQ9Y262 564 aaKnown RBP23.33■■□□□ 1.33
U2AF1-206ENST00000464750 VDAC3Q9Y277 283 aa23.33■■□□□ 1.33
U2AF1-206ENST00000464750 C6orf47O95873 294 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 LCN1P31025 176 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 CLDN20P56880 219 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 POU6F2P78424 691 aaPredicted RBP23.32■■□□□ 1.32
U2AF1-206ENST00000464750 PDCD2Q16342 344 aaPredicted RBP23.32■■□□□ 1.32
U2AF1-206ENST00000464750 OR2A2Q6IF42 318 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 NATD1Q8N6N6 113 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 ZNF781Q8N8C0 355 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 FIG4Q92562 907 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 CDS1Q92903 461 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 COQ8BQ96D53 544 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 STACQ99469 402 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 PRPF18Q99633 342 aaKnown RBP23.32■■□□□ 1.32
U2AF1-206ENST00000464750 BTBD2Q9BX70 525 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 CXorf36Q9H7Y0 433 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 ZNF395Q9H8N7 513 aaPredicted RBP23.32■■□□□ 1.32
U2AF1-206ENST00000464750 HHATLQ9HCP6 504 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 SSU72Q9NP77 194 aaKnown RBP23.32■■□□□ 1.32
U2AF1-206ENST00000464750 DUSP22Q9NRW4 184 aa23.32■■□□□ 1.32
U2AF1-206ENST00000464750 MED13LQ71F56 2210 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 G6PDP11413 515 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 EPXP11678 715 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 HPGDP15428 266 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 PRPS1L1P21108 318 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 MAD2L1Q13257 205 aaPredicted RBP23.31■■□□□ 1.32
U2AF1-206ENST00000464750 TP53BP2Q13625 1128 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 DAZAP2Q15038 168 aaPredicted RBP23.31■■□□□ 1.32
U2AF1-206ENST00000464750 TMEM44Q2T9K0 475 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 SPDYE7PQ495Y7 208 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 SPNS3Q6ZMD2 512 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 RIMKLAQ8IXN7 391 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 OR56A1Q8NGH5 318 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 PSMA8Q8TAA3 256 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 PPP1R36Q96LQ0 422 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 CENPHQ9H3R5 247 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 PIGUQ9H490 435 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 NEUROD4Q9HD90 331 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 UBQLN4Q9NRR5 601 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 RAB21Q9UL25 225 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 AP4B1Q9Y6B7 739 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 ABCA4P78363 2273 aa23.31■■□□□ 1.32
U2AF1-206ENST00000464750 SCDO00767 359 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 TM9SF1O15321 606 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 BIRC5O15392 142 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 TNFRSF21O75509 655 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 CRHP06850 196 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 ZNF17P17021 662 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 CPOXP36551 454 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 CCT3P49368 545 aaKnown RBP23.3■■□□□ 1.32
U2AF1-206ENST00000464750 ART1P52961 327 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 ABCE1P61221 599 aaKnown RBP23.3■■□□□ 1.32
U2AF1-206ENST00000464750 LSM12Q3MHD2 195 aaKnown RBP23.3■■□□□ 1.32
U2AF1-206ENST00000464750 CEP85LQ5SZL2 805 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 CDC73Q6P1J9 531 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 CDC20BQ86Y33 519 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 CNEP1R1Q8N9A8 125 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 SH3YL1Q96HL8 342 aaPredicted RBP23.3■■□□□ 1.32
U2AF1-206ENST00000464750 ZNF845Q96IR2 970 aaPredicted RBP23.3■■□□□ 1.32
U2AF1-206ENST00000464750 ACTRT3Q9BYD9 372 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 BHLHE41Q9C0J9 482 aaPredicted RBP23.3■■□□□ 1.32
U2AF1-206ENST00000464750 NOP53Q9NZM5 478 aaKnown RBP23.3■■□□□ 1.32
U2AF1-206ENST00000464750 ZNF175Q9Y473 711 aa23.3■■□□□ 1.32
U2AF1-206ENST00000464750 A0A087WZY1 265 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 RPS3AP61247 264 aaKnown RBP23.29■■□□□ 1.32
U2AF1-206ENST00000464750 EMX2Q04743 252 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 PON3Q15166 354 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 FBXW10Q5XX13 1052 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 VWA1Q6PCB0 445 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 MISPQ8IVT2 679 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 METTL25Q8N6Q8 603 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 FNDC9Q8TBE3 224 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 SFXN5Q8TD22 340 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 ZBTB9Q96C00 473 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 ZIM3Q96PE6 472 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 DUSP26Q9BV47 211 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 GIN1Q9NXP7 522 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 ASIC5Q9NY37 505 aa23.29■■□□□ 1.32
U2AF1-206ENST00000464750 FAF1Q9UNN5 650 aaPredicted RBP23.29■■□□□ 1.32
U2AF1-206ENST00000464750 A0A1W2PQD3 144 aa23.28■■□□□ 1.32
U2AF1-206ENST00000464750 A8MXE2 369 aa23.28■■□□□ 1.32
U2AF1-206ENST00000464750 CFLARO15519 480 aa23.28■■□□□ 1.32
U2AF1-206ENST00000464750 SMNDC1O75940 238 aaKnown RBP eCLIP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms