RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 NDUFB5O43674 189 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 KCNK2O95069 426 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 OXSR1O95747 527 aaPredicted RBP12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 CHRNGP07510 517 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 NUDT17P0C025 328 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 ACP2P11117 423 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 MAPK1P28482 360 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 ALDH3A1P30838 453 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 RPL3P39023 403 aaKnown RBP12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 SERPINB4P48594 390 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 PRKAG1P54619 331 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 ADAM8P78325 824 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 FOXD4Q12950 439 aaPredicted RBP12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 PON3Q15166 354 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 ARL13AQ5H913 290 aaPredicted RBP12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 MFSD12Q6NUT3 480 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 GGNQ86UU5 652 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 MISPQ8IVT2 679 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 DDIASQ8IXT1 998 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 GTPBP8Q8N3Z3 284 aaPredicted RBP12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 SLC16A11Q8NCK7 471 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 OR5M1Q8NGP8 315 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 FNDC9Q8TBE3 224 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 TWIST2Q8WVJ9 160 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 SLC9A6Q92581 669 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 PPP3R2Q96LZ3 170 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 WFIKKN1Q96NZ8 548 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 DLL4Q9NR61 685 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 UBQLN4Q9NRR5 601 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 BEX4Q9NWD9 120 aaPredicted RBP12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 PAQR5Q9NXK6 330 aaPredicted RBP12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 ZNF226Q9NYT6 803 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 LGALS13Q9UHV8 139 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 ATP6V1HQ9UI12 483 aa12.92□□□□□ -0.34
SNRNP40-203ENST00000463988 A0A1W2PPR1 153 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 A0A1W2PQD3 144 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 TLDC2A0PJX2 215 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 SOX30O94993 753 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 ALOX5P09917 674 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 CD53P19397 219 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 UGT2B10P36537 528 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 SERPINB5P36952 375 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 HPCAL1P37235 193 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 PRIM2P49643 509 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 SGCBQ16585 318 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 DUSP5Q16690 384 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 GALNTL6Q49A17 601 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 FAM214BQ7L5A3 538 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 WDR75Q8IWA0 830 aaKnown RBP12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 NATD1Q8N6N6 113 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 CLHC1Q8NHS4 586 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 PSMA8Q8TAA3 256 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 ZBTB8AQ96BR9 441 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 FAM120BQ96EK7 910 aaKnown RBP12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 FAM111AQ96PZ2 611 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 STACQ99469 402 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 BTBD2Q9BX70 525 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 OPN3Q9H1Y3 402 aaPredicted RBP12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 NEUROD4Q9HD90 331 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 DUSP22Q9NRW4 184 aa12.91□□□□□ -0.34
SNRNP40-203ENST00000463988 A0A1W2PRB8 838 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 TMEM233B4DJY2 109 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 C16orf97H3BN30 126 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 PIP5K1BO14986 540 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 SCAMP2O15127 329 aaKnown RBP12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 ADAMDEC1O15204 470 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 LYPLA1O75608 230 aaPredicted RBP12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 POU2F1P14859 743 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 HPGDP15428 266 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 IL11P20809 199 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 CRYGSP22914 178 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 PSMA4P25789 261 aaKnown RBP12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 HOXC12P31275 282 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 RAC1P63000 192 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 SIRPAP78324 504 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 POU4F3Q15319 338 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 XKR7Q5GH72 579 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 CPTPQ5TA50 214 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 FIGNL1Q6PIW4 674 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 SZRD1Q7Z422 152 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 COX18Q8N8Q8 333 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 OR2W6PQ8NHA6 318 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 CAVIN3Q969G5 261 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 C16orf58Q96GQ5 468 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 ADGRG7Q96K78 797 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 MED18Q9BUE0 208 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 ROPN1BQ9BZX4 212 aaPredicted RBP12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 PIGUQ9H490 435 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 ANKZF1Q9H8Y5 726 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 ROPN1Q9HAT0 212 aaPredicted RBP12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 PLSCR4Q9NRQ2 329 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 SIRT3Q9NTG7 399 aaPredicted RBP12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 MED17Q9NVC6 651 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 PROCRQ9UNN8 238 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 VDAC3Q9Y277 283 aa12.9□□□□□ -0.34
SNRNP40-203ENST00000463988 ARID1AO14497 2285 aa12.89□□□□□ -0.35
SNRNP40-203ENST00000463988 DEFB108AA8MXU0 73 aa12.89□□□□□ -0.35
SNRNP40-203ENST00000463988 SHISA8B8ZZ34 492 aa12.89□□□□□ -0.35
SNRNP40-203ENST00000463988 SCDO00767 359 aa12.89□□□□□ -0.35
SNRNP40-203ENST00000463988 EIF1AYO14602 144 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms