RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 LRRC46Q96FV0 321 aa7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 SLC35A4Q96G79 324 aa7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 COX4I2Q96KJ9 171 aa7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 ATP6V1G3Q96LB4 118 aa7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 TUBA1CQ9BQE3 449 aa7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 LMF2Q9BU23 707 aaKnown RBP7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 NUF2Q9BZD4 464 aa7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 ACSS1Q9NUB1 689 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 THAP1Q9NVV9 213 aa7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 BEX4Q9NWD9 120 aaPredicted RBP7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 SH3BP4Q9P0V3 963 aa7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 CLCF1Q9UBD9 225 aa7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 TESMINQ9Y4I5 508 aa7.18□□□□□ -1.26
CDC42BPA-210ENST00000462553 CADP27708 2225 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 PLCE1Q9P212 2302 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 SVEP1Q4LDE5 3571 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 SH3D21A4FU49 640 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 PRAMEF25A6NGN4 478 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 OR6C70A6NIJ9 312 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 C17orf51A8MQB3 221 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 CAPN14A8MX76 684 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 ZNF195O14628 629 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 KLF11O14901 512 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 CPN1P15169 458 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 NAGAP17050 411 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 CCKARP32238 428 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 MASP1P48740 699 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 GAS1P54826 345 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 CLDN8P56748 225 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 PHC1P78364 1004 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 MLC1Q15049 377 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 Q5PR19 223 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 FBXW10Q5XX13 1052 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 OGFOD2Q6N063 350 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 ANGPTL8Q6UXH0 198 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 CLEC9AQ6UXN8 241 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 LARP4Q71RC2 724 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 HDXQ7Z353 690 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 R3HCC1LQ7Z5L2 792 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 YRDCQ86U90 279 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 SLC44A2Q8IWA5 706 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 LRRC34Q8IZ02 419 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 NUP43Q8NFH3 380 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 PSMA8Q8TAA3 256 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 SMPDL3BQ92485 455 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 ZNF75CPQ92670 426 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 COQ8BQ96D53 544 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 ZBED6CLQ96FA7 236 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 MAELQ96JY0 434 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 DACH2Q96NX9 599 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 UCN2Q96RP3 112 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 YIPF4Q9BSR8 244 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 SFXN3Q9BWM7 321 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 RBM24Q9BX46 236 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 OR2B2Q9GZK3 357 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 CXorf36Q9H7Y0 433 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 VIPAS39Q9H9C1 493 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 GALNT9Q9HCQ5 603 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 NEUROD4Q9HD90 331 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 DDX18Q9NVP1 670 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 NKIRAS1Q9NYS0 192 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 TAS2R9Q9NYW1 312 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 NOP53Q9NZM5 478 aaKnown RBP7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 FLRT3Q9NZU0 649 aa7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 MARCOQ9UEW3 520 aaPredicted RBP7.17□□□□□ -1.26
CDC42BPA-210ENST00000462553 NBEAL1Q6ZS30 2694 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 GXYLT2A0PJZ3 443 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 KIAA1324LA8MWY0 1029 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 DEFB108AA8MXU0 73 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 WIPF1O43516 503 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 SCN2BO60939 215 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 ICOSLGO75144 302 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 TNFSF13O75888 250 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 NKX2-2O95096 273 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 RCBTB2O95199 551 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 LY6G6DO95868 133 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 C6orf47O95873 294 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 ACTL6AO96019 429 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 IGKV1D-16P01601 117 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 KITP10721 976 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 ACP2P11117 423 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 CYP4B1P13584 511 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 PRPS1L1P21108 318 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 EPHA3P29320 983 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 ADSLP30566 484 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 RPL3P39023 403 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 LHX2P50458 406 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 MANFP55145 182 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 GFRA1P56159 465 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 NKX6-1P78426 367 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 MAD2L1Q13257 205 aaPredicted RBP7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 GAB1Q13480 694 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 RCAN2Q14206 197 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 SF3B4Q15427 424 aaKnown RBP eCLIP7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 SHEQ5VZ18 495 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 ATG16L1Q676U5 607 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 MFSD12Q6NUT3 480 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 NUP54Q7Z3B4 507 aa7.16□□□□□ -1.26
CDC42BPA-210ENST00000462553 LUZP2Q86TE4 346 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms