RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 IRGMA1A4Y4 181 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 SH3PXD2BA1X283 911 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 SERINC4A6NH21 518 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 FAM47E-STBD1D6RA91 191 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 PROB1E7EW31 1015 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 STMND1H3BQB6 276 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 PDLIM1O00151 329 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 PEX12O00623 359 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 TP53I11O14683 189 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 BCKDKO14874 412 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 DNAJB6O75190 326 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 REM1O75628 298 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 CYP7B1O75881 506 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 RECKO95980 971 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 CSTAP01040 98 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 RPSAP08865 295 aaKnown RBP6.9□□□□□ -1.3
LSG1-205ENST00000461343 CT45A8P0DMV1 189 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 CT45A9P0DMV2 189 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 UBL4AP11441 157 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 MMP11P24347 488 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 MSX1P28360 303 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 RBMS1P29558 406 aaKnown RBP6.9□□□□□ -1.3
LSG1-205ENST00000461343 LIMS1P48059 325 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 TUBA4AP68366 448 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 RNF4P78317 190 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 PUM1Q14671 1186 aaKnown RBP eCLIP6.9□□□□□ -1.39e-6■■■■□ 23.7
LSG1-205ENST00000461343 SSPNQ14714 243 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 MAPK11Q15759 364 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 EXOC3L2Q2M3D2 409 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 IQCCQ4KMZ1 466 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 CT45A2Q5DJT8 189 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 C6orf52Q5T4I8 152 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 PLAG1Q6DJT9 500 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 JMJD6Q6NYC1 403 aaPredicted RBP6.9□□□□□ -1.3
LSG1-205ENST00000461343 FIGNL1Q6PIW4 674 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 OPN5Q6U736 354 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 ZNF836Q6ZNA1 936 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 NDUFAF7Q7L592 441 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 NUP54Q7Z3B4 507 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 P3H2Q8IVL5 708 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 CHERPQ8IWX8 916 aaKnown RBP6.9□□□□□ -1.3
LSG1-205ENST00000461343 GPALPP1Q8IXQ4 340 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 CYP4Z2PQ8N1L4 340 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 SLC5A8Q8N695 610 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 CLDN22Q8N7P3 220 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 ZNF614Q8N883 585 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 LSMEM1Q8N8F7 131 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 OR4C15Q8NGM1 316 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 OR6T1Q8NGN1 323 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 GNPDA2Q8TDQ7 276 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 TMEM234Q8WY98 164 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 PIK3R3Q92569 461 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 HDAC2Q92769 488 aaKnown RBP6.9□□□□□ -1.3
LSG1-205ENST00000461343 OSTF1Q92882 214 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 TSLPQ969D9 159 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 SLC41A3Q96GZ6 507 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 ZNF570Q96NI8 536 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 SLC38A2Q96QD8 506 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 GAL3ST4Q96RP7 486 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 FEVQ99581 238 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 SPSB2Q99619 263 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 MCHR1Q99705 422 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 SLC29A1Q99808 456 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 MRPS26Q9BYN8 205 aaKnown RBP6.9□□□□□ -1.3
LSG1-205ENST00000461343 DEFB126Q9BYW3 111 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 FAM192AQ9GZU8 254 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 ZNF700Q9H0M5 742 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 TOR3AQ9H497 397 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 SMOC1Q9H4F8 434 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 FAM118AQ9NWS6 357 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 ABI3Q9P2A4 366 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 METRNQ9UJH8 293 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 BAIAP2Q9UQB8 552 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 TPRKBQ9Y3C4 175 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 PTRH2Q9Y3E5 179 aaKnown RBP6.9□□□□□ -1.3
LSG1-205ENST00000461343 CLDN16Q9Y5I7 305 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 GMPPBQ9Y5P6 360 aa6.9□□□□□ -1.3
LSG1-205ENST00000461343 ADAMTS20P59510 1910 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 CCDC88CQ9P219 2028 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 SPTBP11277 2137 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 NSG1A0A0A6YYJ2 146 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 A0A1W2PS29 197 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 PRAMEF27A3QJZ7 478 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 SH3D21A4FU49 640 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 ALG1L2C9J202 215 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.89□□□□□ -1.31
LSG1-205ENST00000461343 NPIPB9F8W1W9 429 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 ZNF264O43296 627 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 NDUFB5O43674 189 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 CHP2O43745 196 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 FCMRO60667 390 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 RCBTB2O95199 551 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 UTS2O95399 124 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 LYNP07948 512 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 LINGO3P0C6S8 592 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 CCDC159P0C7I6 412 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 CEACAM1P13688 526 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 OSMP13725 252 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 PGCP20142 388 aa6.89□□□□□ -1.31
LSG1-205ENST00000461343 FPR3P25089 353 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms