RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	CDK2AP2	O75956	126 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	DFFB	O76075	338 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	NR3C1	P04150	777 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	UMOD	P07911	640 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	FAM157C	P0CG43	387 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	STAG3L3	P0CL85	134 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	PNMT	P11086	282 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	UQCRB	P14927	111 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	MX1	P20591	662 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	CDC25A	P30304	524 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	RFC2	P35250	354 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	ID1	P41134	155 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	SOX3	P41225	446 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	MAGEA8	P43361	318 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	BRCC3	P46736	316 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	FHIT	P49789	147 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	SUCLG1	P53597	346 aa	Known RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	AP3M2	P53677	418 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	PLA2G16	P53816	162 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	SEC61G	P60059	68 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	RPL27	P61353	136 aa	Known RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	LTB	Q06643	244 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	NCBP1	Q09161	790 aa	Known RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	TFDP1	Q14186	410 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	MAPK6	Q16659	721 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	CARD17	Q5XLA6	110 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	STEAP1B	Q6NZ63	245 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	C8orf82	Q6P1X6	216 aa	Predicted RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	KCNIP4	Q6PIL6	250 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044		Q6ZVQ6	151 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	TRPM8	Q7Z2W7	1104 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	KIAA1328	Q86T90	577 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	VPS36	Q86VN1	386 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	SFR1	Q86XK3	245 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	SPATA2L	Q8IUW3	424 aa	Predicted RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	KIRREL3	Q8IZU9	778 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	CLEC4F	Q8N1N0	589 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	ELMOD1	Q8N336	334 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	PDCL2	Q8N4E4	241 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	FAM89B	Q8N5H3	189 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	IQCF1	Q8N6M8	205 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	NECAB1	Q8N987	351 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	OR4C3	Q8NH37	302 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	APOBEC4	Q8WW27	367 aa	Known RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	RAPGEF5	Q92565	580 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	NEUROG1	Q92886	237 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	ART4	Q93070	314 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	MRPL24	Q96A35	216 aa	Known RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	ADIPOR1	Q96A54	375 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	TMEM143	Q96AN5	459 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	C18orf25	Q96B23	403 aa	Predicted RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	OPTN	Q96CV9	577 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	SH3YL1	Q96HL8	342 aa	Predicted RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	PANX1	Q96RD7	426 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	IL12RB2	Q99665	862 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	OMD	Q99983	421 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	TTYH2	Q9BSA4	534 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	NUP58	Q9BVL2	599 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	ROPN1B	Q9BZX4	212 aa	Predicted RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	STRADB	Q9C0K7	418 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	GLT8D2	Q9H1C3	349 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	EHD1	Q9H4M9	534 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	FNDC4	Q9H6D8	234 aa	Predicted RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	UBE2Z	Q9H832	354 aa	Predicted RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	ANKRA2	Q9H9E1	313 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	GPN2	Q9H9Y4	310 aa	Predicted RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	C3orf14	Q9HBI5	128 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	POLE4	Q9NR33	117 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	C1orf123	Q9NWV4	160 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	GHRL	Q9UBU3	117 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	SUN2	Q9UH99	717 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	IKZF3	Q9UKT9	509 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	ELF5	Q9UKW6	265 aa	Predicted RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	MEMO1	Q9Y316	297 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	IFT52	Q9Y366	437 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	CHTOP	Q9Y3Y2	248 aa	Known RBP	2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	DUOX1	Q9NRD9	1551 aa		2.78	□□□□□ -1.96
FXR1-204	ENST00000461044	SHROOM3	Q8TF72	1996 aa		2.78	□□□□□ -1.97
FXR1-204	ENST00000461044	PIEZO2	Q9H5I5	2752 aa		2.78	□□□□□ -1.97
FXR1-204	ENST00000461044	OTOGL	Q3ZCN5	2332 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	ECM29	Q5VYK3	1845 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	KTN1	Q86UP2	1357 aa	Known RBP	2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	RTL9	Q8NET4	1388 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	SPTA1	P02549	2419 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	LOC105371242	A0A075B767	164 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044		A0A1B0GVL5	298 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	FAM74A7	A6NL05	159 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	PRR23D1	E9PI22	279 aa	Predicted RBP	2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	CLDN5	O00501	218 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	CASK	O14936	926 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	EPHB6	O15197	1021 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	CASC3	O15234	703 aa	Known RBP	2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	SIGLEC5	O15389	551 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	AKR7A2	O43488	359 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	RNF13	O43567	381 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	TSPAN2	O60636	221 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	PAH	P00439	452 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	OAS1	P00973	400 aa	Known RBP	2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	AGT	P01019	485 aa		2.77	□□□□□ -1.97
FXR1-204	ENST00000461044	IGHV4-39	P01824	125 aa		2.77	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms