RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CFIP05156 583 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 HMGN2P05204 90 aaKnown RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 LIFP15018 202 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 CSNK2A2P19784 350 aaPredicted RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 PTGER1P34995 402 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 EIF2S3P41091 472 aaKnown RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 OR1D4P47884 311 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 PLA2G16P53816 162 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 CTBP2P56545 445 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SIM1P81133 766 aaPredicted RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 DCDP81605 110 aaKnown RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 ERV3-1Q14264 604 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 RBBP5Q15291 538 aaKnown RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 CD226Q15762 336 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SYPL1Q16563 259 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 C6orf141Q5SZD1 244 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 FAM199XQ6PEV8 388 aaPredicted RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 TMEM107Q6UX40 140 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 PAGE2Q7Z2X7 111 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SLC46A3Q7Z3Q1 461 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 ERI1Q8IV48 349 aaKnown RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 MFSD4AQ8N468 514 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SLC15A4Q8N697 577 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 PAQR8Q8TEZ7 354 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 ATOH1Q92858 354 aaPredicted RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 MAL2Q969L2 176 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 NMD3Q96D46 503 aaKnown RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 VMP1Q96GC9 406 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SLC41A3Q96GZ6 507 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 HSH2DQ96JZ2 352 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SH3GL1Q99961 368 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 RBM4BQ9BQ04 359 aaKnown RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 RBM4Q9BWF3 364 aaKnown RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 ACTRT3Q9BYD9 372 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 POLR1BQ9H9Y6 1135 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 NCOR1O75376 2440 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 PINLYPA6NC86 204 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SEC14L5O43304 696 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 MITFO75030 526 aaPredicted RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 OR2B3O76000 313 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 CLIC3O95833 236 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 THRBP10828 461 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 NAGAP17050 411 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 FPR1P21462 350 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 AGXTP21549 392 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SSTR4P31391 388 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 CD97P48960 835 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 RPS6KA3P51812 740 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 TMBIM6P55061 237 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 GFRA1P56159 465 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 CDK5Q00535 292 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 ROR2Q01974 943 aaKnown RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 MVKQ03426 396 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 EPS8Q12929 822 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 KCNAB2Q13303 367 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 RAPSNQ13702 412 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SSPNQ14714 243 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 HIST2H2ACQ16777 129 aaPredicted RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 LRRC36Q1X8D7 754 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 MICAQ29983 383 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 GRAMD1BQ3KR37 738 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 KRTAP27-1Q3LI81 207 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 ENTPD8Q5MY95 495 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 HIST2H2AA3Q6FI13 130 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 OR2T5Q6IEZ7 315 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SPATA24Q86W54 205 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 RNF130Q86XS8 419 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 KIF18BQ86Y91 864 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SLC30A8Q8IWU4 369 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 B3GNT7Q8NFL0 401 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 OR4K14Q8NGD5 310 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 OR5D16Q8NGK9 328 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 OR2T29Q8NH02 315 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 OR14A16Q8NHC5 309 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 CHAC2Q8WUX2 184 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 POM121Q96HA1 1249 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 DEPDC7Q96QD5 511 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 TREX2Q9BQ50 279 aaPredicted RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 SLC35A5Q9BS91 424 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 UGT2B28Q9BY64 529 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 NAA50Q9GZZ1 169 aaKnown RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 OR10A5Q9H207 317 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 C12orf10Q9HB07 376 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 PFDN4Q9NQP4 134 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SEMA3GQ9NS98 782 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 DEPPQ9NTK1 212 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 HCN3Q9P1Z3 774 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 IFT80Q9P2H3 777 aaPredicted RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 ENPP5Q9UJA9 477 aa4.54□□□□□ -1.68
RIF1-207ENST00000454583 SAMD4AQ9UPU9 718 aaKnown RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 MRPS18BQ9Y676 258 aaKnown RBP4.54□□□□□ -1.68
RIF1-207ENST00000454583 LOC100130705A0A1B0GUX0 176 aa4.53□□□□□ -1.68
RIF1-207ENST00000454583 OR6C70A6NIJ9 312 aa4.53□□□□□ -1.68
RIF1-207ENST00000454583 WISP2O76076 250 aa4.53□□□□□ -1.68
RIF1-207ENST00000454583 LRATO95237 230 aa4.53□□□□□ -1.68
RIF1-207ENST00000454583 IGHMP01871 453 aa4.53□□□□□ -1.68
RIF1-207ENST00000454583 HBQ1P09105 142 aa4.53□□□□□ -1.68
RIF1-207ENST00000454583 RNH1P13489 461 aaKnown RBP4.53□□□□□ -1.68
RIF1-207ENST00000454583 GSTT1P30711 240 aa4.53□□□□□ -1.68
RIF1-207ENST00000454583 DNAJA1P31689 397 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms