RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 A8MXE2 369 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 H0YC42 278 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 SCDO00767 359 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 MSTNO14793 375 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 TYROBPO43914 113 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 TNFRSF21O75509 655 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 LYPLA1O75608 230 aaPredicted RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 TNFSF13O75888 250 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 SMNDC1O75940 238 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHD3-206ENST00000452447 OXSR1O95747 527 aaPredicted RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 NGFRP08138 427 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 ACP2P11117 423 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 LAMP1P11279 417 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 TBXA2RP21731 343 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 DNASE1P24855 282 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 LCN1P31025 176 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 CPOXP36551 454 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 SUCLG1P53597 346 aaKnown RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 TPD52P55327 224 aaPredicted RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 PTGR1Q14914 329 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 SGCBQ16585 318 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 DUSP5Q16690 384 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHD3-206ENST00000452447 KRT71Q3SY84 523 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 C6orf136Q5SQH8 315 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 IL23RQ5VWK5 629 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 OR7A2PQ8NGA2 310 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 OR4C3Q8NH37 302 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 TUBGCP3Q96CW5 907 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 FAM120BQ96EK7 910 aaKnown RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 C16orf58Q96GQ5 468 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 UBQLN4Q9NRR5 601 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 CCM2LQ9NUG4 571 aaPredicted RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 NDRG3Q9UGV2 375 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHD3-206ENST00000452447 AP4B1Q9Y6B7 739 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 V9GYY5 206 aaPredicted RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 ARID1AO14497 2285 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 CASKO14936 926 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 RGS16O15492 202 aaPredicted RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 CTIFO43310 598 aaKnown RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 HSPA4LO95757 839 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 HMGN2P05204 90 aaKnown RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 ATP6V1C1P21283 382 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 ARRB2P32121 409 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 CLDN15P56746 228 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 CLDN20P56880 219 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 POU6F2P78424 691 aaPredicted RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 LASP1Q14847 261 aaKnown RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 LSM12Q3MHD2 195 aaKnown RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 SPDYE7PQ495Y7 208 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 GATSQ8NAP1 163 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 FNDC9Q8TBE3 224 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 FAM110BQ8TC76 370 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 OR5P2Q8WZ92 322 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 FIG4Q92562 907 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 OTUB1Q96FW1 271 aaPredicted RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 C3orf30Q96M34 536 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 DACH2Q96NX9 599 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 STACQ99469 402 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 FOXC2Q99958 501 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 TMEM109Q9BVC6 243 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 BTBD2Q9BX70 525 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 LIME1Q9H400 295 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 SIRT3Q9NTG7 399 aaPredicted RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 FAF1Q9UNN5 650 aaPredicted RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 EIF3LQ9Y262 564 aaKnown RBP11.62□□□□□ -0.55
CHD3-206ENST00000452447 PLEKHA6Q9Y2H5 1048 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 ZNF175Q9Y473 711 aa11.62□□□□□ -0.55
CHD3-206ENST00000452447 ROS1P08922 2347 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 A0A087WZY1 265 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 SH3D21A4FU49 640 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 CFLARO15519 480 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 GOSR1O95249 250 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 ZNF17P17021 662 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 PRPS1L1P21108 318 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 ETV4P43268 484 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 CCT3P49368 545 aaKnown RBP11.61□□□□□ -0.55
CHD3-206ENST00000452447 ZNF41P51814 821 aaPredicted RBP11.61□□□□□ -0.55
CHD3-206ENST00000452447 SIRPAP78324 504 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 OCRLQ01968 901 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 MAD2L1Q13257 205 aaPredicted RBP11.61□□□□□ -0.55
CHD3-206ENST00000452447 TP53BP2Q13625 1128 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 PON3Q15166 354 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 CCNJQ5T5M9 372 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 PPP4R4Q6NUP7 873 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 MISPQ8IVT2 679 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 MREGQ8N565 214 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 KRTCAP2Q8N6L1 136 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 ADAMTS15Q8TE58 950 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 STARD4Q96DR4 205 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 PGM2Q96G03 612 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 SH3YL1Q96HL8 342 aaPredicted RBP11.61□□□□□ -0.55
CHD3-206ENST00000452447 ZNF845Q96IR2 970 aaPredicted RBP11.61□□□□□ -0.55
CHD3-206ENST00000452447 ACTRT3Q9BYD9 372 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 PRRG4Q9BZD6 226 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 PIGUQ9H490 435 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 NEUROD4Q9HD90 331 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 DUSP22Q9NRW4 184 aa11.61□□□□□ -0.55
CHD3-206ENST00000452447 ARGLU1Q9NWB6 273 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms