RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TP53I11O14683 189 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 NME6O75414 186 aaPredicted RBP15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 NRG3P56975 720 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 NUP107P57740 925 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 PMPCAQ10713 525 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 KPNB1Q14974 876 aaKnown RBP15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 ZNHIT3Q15649 155 aaPredicted RBP15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 WLSQ5T9L3 541 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 SAXO2Q658L1 398 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 CCDC71Q8IV32 467 aaPredicted RBP15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 PGAM4Q8N0Y7 254 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 OR8J3Q8NGG0 315 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 SPPL2AQ8TCT8 520 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 CA5BP1Q8WTZ4 195 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 NEURL3Q96EH8 262 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 TACO1Q9BSH4 297 aaKnown RBP15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 THUMPD3Q9BV44 507 aaKnown RBP15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 SLC6A15Q9H2J7 730 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 ALKBH4Q9NXW9 302 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 ACAD8Q9UKU7 415 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 RNF6Q9Y252 685 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 L3MBTL1Q9Y468 752 aa15.58■□□□□ 0.08
PRPF40A-204ENST00000450303 TRBV5-3A0A0A0MS03 114 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 DUXAA6NLW8 204 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 AQP7O14520 342 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 FKBP6O75344 327 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 PSMG1O95456 288 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 CBX7O95931 251 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 ENDOUP21128 410 aaKnown RBP15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 MATN1P21941 496 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 PTPN6P29350 595 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 PSME3P61289 254 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 GAB1Q13480 694 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 CAPRIN1Q14444 709 aaKnown RBP15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 GTDC1Q4AE62 458 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 NANOGP8Q6NSW7 305 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 JADE3Q92613 823 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 RND1Q92730 232 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 ACTRT3Q9BYD9 372 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 RUBCNLQ9H714 662 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 ZNF703Q9H7S9 590 aaPredicted RBP15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 NANOGQ9H9S0 305 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 THUMPD1Q9NXG2 353 aaKnown RBP15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 SLC25A37Q9NYZ2 338 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 SPRR3Q9UBC9 169 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 GMEB1Q9Y692 573 aa15.57■□□□□ 0.08
PRPF40A-204ENST00000450303 OR14I1A6ND48 311 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 BCKDKO14874 412 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 SUSD5O60279 629 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 TRIM3O75382 744 aaPredicted RBP15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 AGR2O95994 175 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 HMGN2P05204 90 aaKnown RBP15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 HOXB9P17482 250 aaPredicted RBP15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 ACVR2AP27037 513 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 GDF1P27539 372 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 ABCD3P28288 659 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 CPOXP36551 454 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 KHKP50053 298 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 DCAF7P61962 342 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 SLC25A3Q00325 362 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 ZNF155Q12901 538 aaPredicted RBP15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 FADDQ13158 208 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 LASP1Q14847 261 aaKnown RBP15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 LURAP1LQ8IV03 231 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 CDRT4Q8N9R6 151 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 ADAMTS15Q8TE58 950 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 RSRC1Q96IZ7 334 aaKnown RBP15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 ZNF597Q96LX8 424 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 ECSITQ9BQ95 431 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 CPPED1Q9BRF8 314 aaPredicted RBP15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 ANGPTL4Q9BY76 406 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 UCK2Q9BZX2 261 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 EQTNQ9NQ60 294 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 SLC6A13Q9NSD5 602 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 C15orf41Q9Y2V0 281 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 PCDHGB3Q9Y5G1 929 aa15.56■□□□□ 0.08
PRPF40A-204ENST00000450303 NKX2-6A6NCS4 301 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 C2orf72A6NCS6 295 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 TMEM247A6NEH6 219 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 FAM90A27PA6NNH2 459 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 FXYD1O00168 92 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 GNB5O14775 395 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 HCN1O60741 890 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 ENTPD5O75356 428 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 PPM1BO75688 479 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 TRAPPC6AO75865 159 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 ALOX5P09917 674 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 GPX2P18283 190 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 CASP3P42574 277 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 CRATP43155 626 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 TMED10P49755 219 aaKnown RBP15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 EMDP50402 254 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 RCN1Q15293 331 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 TBCELQ5QJ74 424 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 RTL6Q6ICC9 239 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 MFSD12Q6NUT3 480 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 CDC73Q6P1J9 531 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 AAGABQ6PD74 315 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 RNF130Q86XS8 419 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 MSRB3Q8IXL7 192 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms