RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 LINC01387J3KSC0 135 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 NDUFB5O43674 189 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 TNFRSF21O75509 655 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 HMGN2P05204 90 aaKnown RBP17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 DDX5P17844 614 aaKnown RBP17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 TBXA2RP21731 343 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 RPL3P39023 403 aaKnown RBP17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 PRIM2P49643 509 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 DIO3P55073 304 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 EEF1A1P68104 462 aaKnown RBP17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 LASP1Q14847 261 aaKnown RBP17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 CPTPQ5TA50 214 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 EEF1A1P5Q5VTE0 462 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 OR2A2Q6IF42 318 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 VWA1Q6PCB0 445 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 NUDCD3Q8IVD9 361 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 KRTCAP2Q8N6L1 136 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 NINJ1Q92982 152 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 STARD4Q96DR4 205 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 CHMP6Q96FZ7 201 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 PKNOX2Q96KN3 472 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 TMEM109Q9BVC6 243 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 PLEKHA6Q9Y2H5 1048 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 ZFHX3Q15911 3703 aa17.19■□□□□ 0.34
AL954642.1-201ENST00000428088 WDR91A4D1P6 747 aa17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 LYPLA1O75608 230 aaPredicted RBP17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 SMNDC1O75940 238 aaKnown RBP eCLIP17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 CRHP06850 196 aa17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 CPOXP36551 454 aa17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 POU6F2P78424 691 aaPredicted RBP17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 PON3Q15166 354 aa17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 TMEM44Q2T9K0 475 aa17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 KRT71Q3SY84 523 aa17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 EXOSC6Q5RKV6 272 aaKnown RBP17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 FNDC9Q8TBE3 224 aa17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 CDS1Q92903 461 aa17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 TUBGCP3Q96CW5 907 aa17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 NPAS1Q99742 590 aa17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 AP4B1Q9Y6B7 739 aa17.18■□□□□ 0.34
AL954642.1-201ENST00000428088 CTIFO43310 598 aaKnown RBP17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 ITM2AO43736 263 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 C6orf47O95873 294 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 NGFRP08138 427 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 HPGDP15428 266 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 KIR2DL2P43627 348 aaPredicted RBP17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 SERPINB4P48594 390 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 CCT3P49368 545 aaKnown RBP17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 SIRPAP78324 504 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 FAM27E3Q08E93 113 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 BTLAQ7Z6A9 289 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 MREGQ8N565 214 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 METTL25Q8N6Q8 603 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 PPP1R14CQ8TAE6 165 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 OR5P2Q8WZ92 322 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 ZBTB9Q96C00 473 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 COQ8BQ96D53 544 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 PGM2Q96G03 612 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 SH3YL1Q96HL8 342 aaPredicted RBP17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 DACH2Q96NX9 599 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 BTBD2Q9BX70 525 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 CXorf36Q9H7Y0 433 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 ZNF395Q9H8N7 513 aaPredicted RBP17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 UBQLN4Q9NRR5 601 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 ATAD3AQ9NVI7 634 aa17.17■□□□□ 0.34
AL954642.1-201ENST00000428088 SH3D21A4FU49 640 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 SCDO00767 359 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 MSTNO14793 375 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 RGS16O15492 202 aaPredicted RBP17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 HSPA4LO95757 839 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 DNASE1P24855 282 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 RPS3AP61247 264 aaKnown RBP17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 ZNF844Q08AG5 666 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 TP53BP2Q13625 1128 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 POU4F3Q15319 338 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 SGCBQ16585 318 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 GGNQ86UU5 652 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 PPP1R36Q96LQ0 422 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 STACQ99469 402 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 FOXC2Q99958 501 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 KLHDC3Q9BQ90 382 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 PARD6BQ9BYG5 372 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 OPN3Q9H1Y3 402 aaPredicted RBP17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 PIGUQ9H490 435 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 RNF122Q9H9V4 155 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 DUSP22Q9NRW4 184 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 GIN1Q9NXP7 522 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 EIF3LQ9Y262 564 aaKnown RBP17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 ZNF175Q9Y473 711 aa17.16■□□□□ 0.34
AL954642.1-201ENST00000428088 A0A087WZY1 265 aa17.15■□□□□ 0.34
AL954642.1-201ENST00000428088 EIF1AYO14602 144 aaKnown RBP17.15■□□□□ 0.34
AL954642.1-201ENST00000428088 OPN1LWP04000 364 aa17.15■□□□□ 0.34
AL954642.1-201ENST00000428088 G6PDP11413 515 aa17.15■□□□□ 0.34
AL954642.1-201ENST00000428088 ZNF17P17021 662 aa17.15■□□□□ 0.34
AL954642.1-201ENST00000428088 PRPS1L1P21108 318 aa17.15■□□□□ 0.34
AL954642.1-201ENST00000428088 LCN1P31025 176 aa17.15■□□□□ 0.34
AL954642.1-201ENST00000428088 CD226Q15762 336 aa17.15■□□□□ 0.34
AL954642.1-201ENST00000428088 CHI3L2Q15782 390 aa17.15■□□□□ 0.34
AL954642.1-201ENST00000428088 PDCD2Q16342 344 aaPredicted RBP17.15■□□□□ 0.34
AL954642.1-201ENST00000428088 LSM12Q3MHD2 195 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms