RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 IGHV2-70P01814 119 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 C1SP09871 688 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 SPI1P17947 270 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 NUDT6P53370 316 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 SEMG2Q02383 582 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 FAM74A1Q5RGS3 127 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 CES4AQ5XG92 561 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 ASB18Q6ZVZ8 466 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 DNAJC22Q8N4W6 341 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 OR2T4Q8NH00 348 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 FAM110BQ8TC76 370 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 PDLIM5Q96HC4 596 aaKnown RBP9.22□□□□□ -0.93
USP54-205ENST00000424265 GABRG3Q99928 467 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 PCDHB11Q9Y5F2 797 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 A0A1W2PP18 115 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 CHP2O43745 196 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 ALDOBP05062 364 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 CRYBA1P05813 215 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 GSK3BP49841 420 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 CCR8P51685 355 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 CLDN20P56880 219 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 CDK3Q00526 305 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 WASH2PQ6VEQ5 465 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 ZNF534Q76KX8 674 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 GPR26Q8NDV2 337 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 OR10G6Q8NH81 332 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 MSLNLQ96KJ4 702 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 COL21A1Q96P44 957 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 HHIPQ96QV1 700 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 RBP7Q96R05 134 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 BCO1Q9HAY6 547 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 COMMD3Q9UBI1 195 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 PCDHGA1Q9Y5H4 931 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 C5orf58C9J3I9 102 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 ADAMDEC1O15204 470 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 NARSO43776 548 aaKnown RBP9.22□□□□□ -0.93
USP54-205ENST00000424265 MMP2P08253 660 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 ITGAMP11215 1152 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 HSD17B1P14061 328 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 ATP5A1P25705 553 aaKnown RBP9.22□□□□□ -0.93
USP54-205ENST00000424265 SSTR4P31391 388 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 CCR7P32248 378 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 CNR2P34972 360 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 ETV6P41212 452 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 PRLHRP49683 370 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 UBE2IP63279 158 aaKnown RBP9.22□□□□□ -0.93
USP54-205ENST00000424265 PRAMEF14Q5SWL7 426 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 LIX1Q8N485 282 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 FAM46DQ8NEK8 389 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 GNG8Q9UK08 70 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 KCNMB2Q9Y691 235 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 KIR2DS5A0A0G2JLQ3 304 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 A0A0G2JNG1 304 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 CBY3A6NI87 242 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 CLCA1A8K7I4 914 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 I6L893 689 aaPredicted RBP9.22□□□□□ -0.93
USP54-205ENST00000424265 KIR2DS3K7RE56 304 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 SLC35G6P0C7Q6 338 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 MPIP34949 423 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 KIR2DS5Q14953 304 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 CRTC2Q53ET0 693 aaPredicted RBP9.22□□□□□ -0.93
USP54-205ENST00000424265 RAB12Q6IQ22 244 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 FJX1Q86VR8 437 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 SLC43A2Q8N370 569 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 MEIOBQ8N635 442 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 TMEM185AQ8NFB2 350 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 PXT1Q8NFP0 134 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 MS4A3Q96HJ5 214 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 BRINP2Q9C0B6 783 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 ARL6Q9H0F7 186 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 RDH14Q9HBH5 336 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 APOBEC3BQ9UH17 382 aaKnown RBP9.22□□□□□ -0.93
USP54-205ENST00000424265 CLEC4EQ9ULY5 219 aa9.22□□□□□ -0.93
USP54-205ENST00000424265 NME4O00746 187 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 RPS2P15880 293 aaKnown RBP9.21□□□□□ -0.93
USP54-205ENST00000424265 NTSP30990 170 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 ARHGAP19Q14CB8 494 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 TBPL2Q6SJ96 375 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 KIAA0907Q7Z7F0 614 aaPredicted RBP9.21□□□□□ -0.93
USP54-205ENST00000424265 PARGQ86W56 976 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 SYT12Q8IV01 421 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 DNAJB8Q8NHS0 232 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 RAB3CQ96E17 227 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 MRPS30Q9NP92 439 aaKnown RBP9.21□□□□□ -0.93
USP54-205ENST00000424265 MARCH4Q9P2E8 410 aaPredicted RBP9.21□□□□□ -0.93
USP54-205ENST00000424265 PISDQ9UG56 409 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 MUTYHQ9UIF7 546 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 CORO2BQ9UQ03 480 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 SCN5AQ14524 2016 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 ANK1P16157 1881 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 EPOPA6NHQ4 379 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 ADAM10O14672 748 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 PEX11BO96011 259 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 LPLP06858 475 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 PRPS2P11908 318 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 CD27P26842 260 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 PTPRRQ15256 657 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 LMX1AQ8TE12 382 aa9.21□□□□□ -0.93
USP54-205ENST00000424265 BARD1Q99728 777 aaKnown RBP9.21□□□□□ -0.93
USP54-205ENST00000424265 PRRX2Q99811 253 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms