RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 NEUROD4Q9HD90 331 aa13.97□□□□□ -0.17
SPC24-201ENST00000423327 SDHAF3Q9NRP4 125 aa13.97□□□□□ -0.17
SPC24-201ENST00000423327 ATAD3AQ9NVI7 634 aa13.97□□□□□ -0.17
SPC24-201ENST00000423327 KCNN3Q9UGI6 736 aa13.97□□□□□ -0.17
SPC24-201ENST00000423327 EIF3LQ9Y262 564 aaKnown RBP13.97□□□□□ -0.17
SPC24-201ENST00000423327 MPDZO75970 2070 aa13.97□□□□□ -0.17
SPC24-201ENST00000423327 HRNRQ86YZ3 2850 aaPredicted RBP13.96□□□□□ -0.17
SPC24-201ENST00000423327 NPIPA5A0A0B4J1W7 369 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 NPIPA7E9PJI5 369 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 RCBTB2O95199 551 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 ALDOCP09972 364 aaKnown RBP13.96□□□□□ -0.17
SPC24-201ENST00000423327 NPIPA8P0DM63 369 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 PRIM2P49643 509 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 DGKQP52824 942 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 CLDN20P56880 219 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 POU6F2P78424 691 aaPredicted RBP13.96□□□□□ -0.17
SPC24-201ENST00000423327 C17orf67Q0P5P2 114 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 MAD2L1Q13257 205 aaPredicted RBP13.96□□□□□ -0.17
SPC24-201ENST00000423327 SF3B4Q15427 424 aaKnown RBP eCLIP13.96□□□□□ -0.172e-6■■□□□ 13
SPC24-201ENST00000423327 BCL2A1Q16548 175 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.96□□□□□ -0.17
SPC24-201ENST00000423327 UBQLNLQ8IYU4 475 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 CLEC4FQ8N1N0 589 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 OR56A1Q8NGH5 318 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 OR5D16Q8NGK9 328 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 SFXN5Q8TD22 340 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 RNASE6Q93091 150 aaKnown RBP13.96□□□□□ -0.17
SPC24-201ENST00000423327 WNT2BQ93097 391 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 BTBD2Q9BX70 525 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 MEAF6Q9HAF1 191 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 GIN1Q9NXP7 522 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 CRIM1Q9NZV1 1036 aa13.96□□□□□ -0.17
SPC24-201ENST00000423327 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 H3BML4 177 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 SDHDO14521 159 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 OIP5O43482 229 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 NDUFB5O43674 189 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 SNNO75324 88 aaPredicted RBP13.95□□□□□ -0.18
SPC24-201ENST00000423327 TNFSF13O75888 250 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 IL18BPO95998 194 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 C1QCP02747 245 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 DDX5P17844 614 aaKnown RBP13.95□□□□□ -0.18
SPC24-201ENST00000423327 POU3F2P20265 443 aaPredicted RBP13.95□□□□□ -0.18
SPC24-201ENST00000423327 UQCRC1P31930 480 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 CLK3P49761 638 aaKnown RBP13.95□□□□□ -0.18
SPC24-201ENST00000423327 RNF144AP50876 292 aaPredicted RBP13.95□□□□□ -0.18
SPC24-201ENST00000423327 RPS26P62854 115 aaKnown RBP13.95□□□□□ -0.18
SPC24-201ENST00000423327 CROCCP2Q86T23 111 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 GGNQ86UU5 652 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 ZZZ3Q8IYH5 903 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 NATD1Q8N6N6 113 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 MGARPQ8TDB4 240 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 FIG4Q92562 907 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 INTS12Q96CB8 462 aaKnown RBP13.95□□□□□ -0.18
SPC24-201ENST00000423327 DTNBP1Q96EV8 351 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 ZNF845Q96IR2 970 aaPredicted RBP13.95□□□□□ -0.18
SPC24-201ENST00000423327 TEX37Q96LM6 180 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 PAIP2Q9BPZ3 127 aaKnown RBP13.95□□□□□ -0.18
SPC24-201ENST00000423327 ZNF559Q9BR84 538 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 ACTRT3Q9BYD9 372 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 PTGES2Q9H7Z7 377 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 TMBIM4Q9HC24 238 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 VDAC3Q9Y277 283 aa13.95□□□□□ -0.18
SPC24-201ENST00000423327 A0A1W2PQD3 144 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 EEF1E1-BLOC1S5C9J1V9 151 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 NPIPB9F8W1W9 429 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 RNASET2O00584 256 aaKnown RBP13.94□□□□□ -0.18
SPC24-201ENST00000423327 SEC14L5O43304 696 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 EEF1E1O43324 174 aaKnown RBP13.94□□□□□ -0.18
SPC24-201ENST00000423327 SNUPNO95149 360 aaKnown RBP13.94□□□□□ -0.18
SPC24-201ENST00000423327 PEPDP12955 493 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 PSMA4P25789 261 aaKnown RBP13.94□□□□□ -0.18
SPC24-201ENST00000423327 LCN1P31025 176 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 OPRM1P35372 400 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 SOAT1P35610 550 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 MAGOHP61326 146 aaKnown RBP13.94□□□□□ -0.18
SPC24-201ENST00000423327 MYBPHQ13203 477 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 PGS1Q32NB8 556 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 PLPPR5Q32ZL2 321 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 LSM12Q3MHD2 195 aaKnown RBP13.94□□□□□ -0.18
SPC24-201ENST00000423327 DCST2Q5T1A1 773 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 HHATQ5VTY9 493 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 OGFOD2Q6N063 350 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 OLIG3Q7RTU3 272 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 ANKRD46Q86W74 232 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 HEATR5AQ86XA9 2040 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 GRAMD2AQ8IUY3 354 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 OR8J2Q8NGG1 315 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 POC1BQ8TC44 478 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 NRGNQ92686 78 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 ZNF524Q96C55 264 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 SH3YL1Q96HL8 342 aaPredicted RBP13.94□□□□□ -0.18
SPC24-201ENST00000423327 ZFP3Q96NJ6 502 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 OR7D2Q96RA2 312 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 PRPF18Q99633 342 aaKnown RBP13.94□□□□□ -0.18
SPC24-201ENST00000423327 TM9SF2Q99805 663 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 PIGQQ9BRB3 760 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 SFXN3Q9BWM7 321 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 UBQLN4Q9NRR5 601 aa13.94□□□□□ -0.18
SPC24-201ENST00000423327 MED17Q9NVC6 651 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms