RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ATAD3AQ9NVI7 634 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 PLEKHA6Q9Y2H5 1048 aa22.84■■□□□ 1.25
VEGFA-208ENST00000417285 A0A087WZY1 265 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 SH3D21A4FU49 640 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 ALG1L2C9J202 215 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 HSPA4LO95757 839 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 CD99P14209 185 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 SUCLG1P53597 346 aaKnown RBP22.83■■□□□ 1.25
VEGFA-208ENST00000417285 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.83■■□□□ 1.25
VEGFA-208ENST00000417285 C6orf136Q5SQH8 315 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 MFSD12Q6NUT3 480 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 APOOLQ6UXV4 268 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 NATD1Q8N6N6 113 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 CNEP1R1Q8N9A8 125 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 OR7A2PQ8NGA2 310 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 OR4C3Q8NH37 302 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 PKNOX2Q96KN3 472 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 SLC39A3Q9BRY0 314 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 TMUB1Q9BVT8 246 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 SSU72Q9NP77 194 aaKnown RBP22.83■■□□□ 1.25
VEGFA-208ENST00000417285 RAB21Q9UL25 225 aa22.83■■□□□ 1.25
VEGFA-208ENST00000417285 A0A1W2PRB8 838 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 H3BML4 177 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 NDUFB5O43674 189 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 SOX30O94993 753 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 RAF1P04049 648 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 ALOX5P09917 674 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 ACP2P11117 423 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 EFNA1P20827 205 aaPredicted RBP22.82■■□□□ 1.24
VEGFA-208ENST00000417285 PRIM2P49643 509 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 PTGR1Q14914 329 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 TMEM44Q2T9K0 475 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 CPTPQ5TA50 214 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 IL23RQ5VWK5 629 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 PAMR1Q6UXH9 720 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 TGIF2LYQ8IUE0 185 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 SLC16A11Q8NCK7 471 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 FBXO30Q8TB52 745 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 SMPDL3BQ92485 455 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 FIG4Q92562 907 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 TUBGCP3Q96CW5 907 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 PGM2Q96G03 612 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 PRPF18Q99633 342 aaKnown RBP22.82■■□□□ 1.24
VEGFA-208ENST00000417285 PINK1Q9BXM7 581 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 PLEKHF2Q9H8W4 249 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 UBQLN4Q9NRR5 601 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 ZCCHC3Q9NUD5 404 aaKnown RBP22.82■■□□□ 1.24
VEGFA-208ENST00000417285 ELOVL5Q9NYP7 299 aa22.82■■□□□ 1.24
VEGFA-208ENST00000417285 EIF3LQ9Y262 564 aaKnown RBP22.82■■□□□ 1.24
VEGFA-208ENST00000417285 MED12LQ86YW9 2145 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 TM9SF1O15321 606 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 BIRC5O15392 142 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 SEC14L5O43304 696 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 SMNDC1O75940 238 aaKnown RBP eCLIP22.81■■□□□ 1.244e-7■■□□□ 12.8
VEGFA-208ENST00000417285 KCNK2O95069 426 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 SERPINE1P05121 402 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 TUBBP07437 444 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 HPGDP15428 266 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 KIR2DL2P43627 348 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-208ENST00000417285 MAD2L1Q13257 205 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-208ENST00000417285 METTL25Q8N6Q8 603 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 OR5M1Q8NGP8 315 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 ACTRT2Q8TDY3 377 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 FAM120BQ96EK7 910 aaKnown RBP22.81■■□□□ 1.24
VEGFA-208ENST00000417285 CENPHQ9H3R5 247 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 RNF122Q9H9V4 155 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 SIRT3Q9NTG7 399 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-208ENST00000417285 GIN1Q9NXP7 522 aa22.81■■□□□ 1.24
VEGFA-208ENST00000417285 WDR91A4D1P6 747 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 H0YC42 278 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 OXSR1O95747 527 aaPredicted RBP22.8■■□□□ 1.24
VEGFA-208ENST00000417285 HRGP04196 525 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 LAMP1P11279 417 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 FCGR2AP12318 317 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 ZNF17P17021 662 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 PRPS1L1P21108 318 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 CD79BP40259 229 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 TPD52P55327 224 aaPredicted RBP22.8■■□□□ 1.24
VEGFA-208ENST00000417285 CLDN20P56880 219 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 PPP2R2AP63151 447 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 KEAP1Q14145 624 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 CHI3L2Q15782 390 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 SGCBQ16585 318 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 DUSP5Q16690 384 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 BTLAQ7Z6A9 289 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 MISPQ8IVT2 679 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 COX18Q8N8Q8 333 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 OR5P2Q8WZ92 322 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 JADE3Q92613 823 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 ZNF845Q96IR2 970 aaPredicted RBP22.8■■□□□ 1.24
VEGFA-208ENST00000417285 ZIM3Q96PE6 472 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 PAQR5Q9NXK6 330 aaPredicted RBP22.8■■□□□ 1.24
VEGFA-208ENST00000417285 SNX8Q9Y5X2 465 aa22.8■■□□□ 1.24
VEGFA-208ENST00000417285 SNUPNO95149 360 aaKnown RBP22.79■■□□□ 1.24
VEGFA-208ENST00000417285 CPOXP36551 454 aa22.79■■□□□ 1.24
VEGFA-208ENST00000417285 ABCE1P61221 599 aaKnown RBP22.79■■□□□ 1.24
VEGFA-208ENST00000417285 FAM27E3Q08E93 113 aa22.79■■□□□ 1.24
VEGFA-208ENST00000417285 PON3Q15166 354 aa22.79■■□□□ 1.24
VEGFA-208ENST00000417285 LSM12Q3MHD2 195 aaKnown RBP22.79■■□□□ 1.24
VEGFA-208ENST00000417285 EXOSC6Q5RKV6 272 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms