RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TREX2Q9BQ50 279 aaPredicted RBP9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 BTBD2Q9BX70 525 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 ACTRT3Q9BYD9 372 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 PIGUQ9H490 435 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 MCCC2Q9HCC0 563 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 GPATCH2Q9NW75 528 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 NKIRAS1Q9NYS0 192 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZNF629Q9UEG4 869 aaPredicted RBP9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 L3MBTL1Q9Y468 752 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 NCKAP5O14513 1909 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 CELSR2Q9HCU4 2923 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 NOTCH2Q04721 2471 aa9.2□□□□□ -0.94
NCKIPSD-202ENST00000413374 UNC79Q9P2D8 2635 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 NCOA6Q14686 2063 aaPredicted RBP9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 ALG1L2C9J202 215 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 RCBTB2O95199 551 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 C1QCP02747 245 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZNF708P17019 499 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 EPHA3P29320 983 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 KIR2DL3P43628 341 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 ASCL1P50553 236 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 UFM1P61960 85 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 SIRPAP78324 504 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 PHC1P78364 1004 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 CD226Q15762 336 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 SMU1Q2TAY7 513 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 NDUFAF6Q330K2 333 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 EXOSC6Q5RKV6 272 aaKnown RBP9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 DCST2Q5T1A1 773 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 NXNQ6DKJ4 435 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 WDR75Q8IWA0 830 aaKnown RBP9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 MEIOBQ8N635 442 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 NATD1Q8N6N6 113 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZNF614Q8N883 585 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 OR56A1Q8NGH5 318 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 RFWD2Q8NHY2 731 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 LINC01560Q8TB33 94 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 PHOSPHO1Q8TCT1 267 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 NRGNQ92686 78 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 RNASE6Q93091 150 aaKnown RBP9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 WNT2BQ93097 391 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 ARL8AQ96BM9 186 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 DTNBP1Q96EV8 351 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 ZNF845Q96IR2 970 aaPredicted RBP9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 MARK4Q96L34 752 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 TEX37Q96LM6 180 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 STACQ99469 402 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 PIGQQ9BRB3 760 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 PINK1Q9BXM7 581 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 MANSC1Q9H8J5 431 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 MEAF6Q9HAF1 191 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 UBQLN4Q9NRR5 601 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 DUSP22Q9NRW4 184 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 THAP1Q9NVV9 213 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 ASIC5Q9NY37 505 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 CRIM1Q9NZV1 1036 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 PCDHGB4Q9UN71 923 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 NAV2Q8IVL1 2488 aa9.19□□□□□ -0.94
NCKIPSD-202ENST00000413374 MAST4O15021 2626 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 CSMD1Q96PZ7 3565 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 RNF103-CHMP3A0A140T963 221 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 SLC22A20A6NK97 555 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 GTPBP1O00178 669 aaKnown RBP9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 SDHDO14521 159 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 EIF1AYO14602 144 aaKnown RBP9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 OIP5O43482 229 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 HCRTR2O43614 444 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 CYP7B1O75881 506 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 SMNDC1O75940 238 aaKnown RBP eCLIP9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 ALDOCP09972 364 aaKnown RBP9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 OR12D1P0DN82 309 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 OPRM1P35372 400 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 GANABQ14697 944 aaKnown RBP9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 CASP8Q14790 479 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 GPR68Q15743 365 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 BCL2A1Q16548 175 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 SGCBQ16585 318 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 FLYWCH1Q4VC44 716 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 SPANXN4Q5MJ08 99 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 ATG16L1Q676U5 607 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 CRYBG3Q68DQ2 2970 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 HMGN2P46Q86SG4 172 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 ADGRE4PQ86SQ3 457 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 CNEP1R1Q8N9A8 125 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 ATP6V1C2Q8NEY4 427 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 B4GALNT2Q8NHY0 566 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 PSMA8Q8TAA3 256 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 TLCD1Q96CP7 247 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 ARSGQ96EG1 525 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 LRRC46Q96FV0 321 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 PCNX1Q96RV3 2341 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 TM9SF2Q99805 663 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 SH3GL2Q99962 352 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 RBM24Q9BX46 236 aaKnown RBP9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 SERHL2Q9H4I8 314 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 TMEM185BQ9H7F4 350 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 MED17Q9NVC6 651 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 CLCF1Q9UBD9 225 aa9.18□□□□□ -0.94
NCKIPSD-202ENST00000413374 HAO1Q9UJM8 370 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms