RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PINK1Q9BXM7 581 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 ZCCHC3Q9NUD5 404 aaKnown RBP13.85□□□□□ -0.19
TPM1-207ENST00000403994 CCM2LQ9NUG4 571 aaPredicted RBP13.85□□□□□ -0.19
TPM1-207ENST00000403994 ZDHHC2Q9UIJ5 367 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 ZNF175Q9Y473 711 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 NUP214P35658 2090 aaPredicted RBP13.84□□□□□ -0.19
TPM1-207ENST00000403994 GOSR1O95249 250 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 SLU7O95391 586 aaKnown RBP13.84□□□□□ -0.19
TPM1-207ENST00000403994 HMGN2P05204 90 aaKnown RBP13.84□□□□□ -0.19
TPM1-207ENST00000403994 ALOX5P09917 674 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 DDX5P17844 614 aaKnown RBP13.84□□□□□ -0.19
TPM1-207ENST00000403994 TBXA2RP21731 343 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 CCKARP32238 428 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 EEFSECP57772 596 aaKnown RBP13.84□□□□□ -0.19
TPM1-207ENST00000403994 EEF1A1P68104 462 aaKnown RBP13.84□□□□□ -0.19
TPM1-207ENST00000403994 ZNF844Q08AG5 666 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 C6orf136Q5SQH8 315 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 CCNJQ5T5M9 372 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 EEF1A1P5Q5VTE0 462 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 VWA1Q6PCB0 445 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 ZCCHC12Q6PEW1 402 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 PAMR1Q6UXH9 720 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 GGNQ86UU5 652 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 KRTCAP2Q8N6L1 136 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 METTL25Q8N6Q8 603 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 CNEP1R1Q8N9A8 125 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 GATSQ8NAP1 163 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 FNDC5Q8NAU1 212 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 PSMA8Q8TAA3 256 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 FNDC9Q8TBE3 224 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 FAM110BQ8TC76 370 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 ZNF845Q96IR2 970 aaPredicted RBP13.84□□□□□ -0.19
TPM1-207ENST00000403994 FOXC2Q99958 501 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 CXXC4Q9H2H0 198 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 RNF122Q9H9V4 155 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 DUSP22Q9NRW4 184 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 FBXO34Q9NWN3 711 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 VDAC3Q9Y277 283 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 PLEKHA6Q9Y2H5 1048 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 SNX8Q9Y5X2 465 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 AP4B1Q9Y6B7 739 aa13.84□□□□□ -0.19
TPM1-207ENST00000403994 SH3D21A4FU49 640 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 A8MXE2 369 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 MSTNO14793 375 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 NDUFB5O43674 189 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 TNFRSF21O75509 655 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 LYPLA1O75608 230 aaPredicted RBP13.83□□□□□ -0.2
TPM1-207ENST00000403994 LCN1P31025 176 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 SERPINB4P48594 390 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 PRIM2P49643 509 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 POU6F2P78424 691 aaPredicted RBP13.83□□□□□ -0.2
TPM1-207ENST00000403994 LASP1Q14847 261 aaKnown RBP13.83□□□□□ -0.2
TPM1-207ENST00000403994 PON3Q15166 354 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 GUSBP1Q15486 140 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 PLPPR5Q32ZL2 321 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 KRT71Q3SY84 523 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 CPTPQ5TA50 214 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 IL23RQ5VWK5 629 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 FBXW10Q5XX13 1052 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 GTPBP8Q8N3Z3 284 aaPredicted RBP13.83□□□□□ -0.2
TPM1-207ENST00000403994 NUDT8Q8WV74 236 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 CDS1Q92903 461 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 STARD4Q96DR4 205 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 DACH2Q96NX9 599 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 STACQ99469 402 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 NPAS1Q99742 590 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 BTBD2Q9BX70 525 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 CXorf36Q9H7Y0 433 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 HHATLQ9HCP6 504 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 ATAD3AQ9NVI7 634 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 TESMINQ9Y4I5 508 aa13.83□□□□□ -0.2
TPM1-207ENST00000403994 A0A087WZY1 265 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 A0A1W2PRB8 838 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 C7orf72A4D263 438 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 SMNDC1O75940 238 aaKnown RBP eCLIP13.82□□□□□ -0.21e-8■■□□□ 11.9
TPM1-207ENST00000403994 C6orf47O95873 294 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 FCGR2AP12318 317 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 KIR2DL2P43627 348 aaPredicted RBP13.82□□□□□ -0.2
TPM1-207ENST00000403994 RIPPLY3P57055 190 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 SIRPAP78324 504 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 OCRLQ01968 901 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 TP53BP2Q13625 1128 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 CD226Q15762 336 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 BTLAQ7Z6A9 289 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 RIMKLAQ8IXN7 391 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 OR56A1Q8NGH5 318 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 SFXN5Q8TD22 340 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 TUBGCP3Q96CW5 907 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 CHMP6Q96FZ7 201 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 SH3YL1Q96HL8 342 aaPredicted RBP13.82□□□□□ -0.2
TPM1-207ENST00000403994 KLHDC3Q9BQ90 382 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 OPN3Q9H1Y3 402 aaPredicted RBP13.82□□□□□ -0.2
TPM1-207ENST00000403994 NEUROD4Q9HD90 331 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 UBQLN4Q9NRR5 601 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 MED17Q9NVC6 651 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 GPATCH2Q9NW75 528 aa13.82□□□□□ -0.2
TPM1-207ENST00000403994 A0A1W2PQD3 144 aa13.81□□□□□ -0.2
TPM1-207ENST00000403994 SCDO00767 359 aa13.81□□□□□ -0.2
TPM1-207ENST00000403994 EIF1AYO14602 144 aaKnown RBP13.81□□□□□ -0.2
TPM1-207ENST00000403994 ITM2AO43736 263 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms