RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ITM2AO43736 263 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 CTAG2O75638 210 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 KCNK2O95069 426 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 OXSR1O95747 527 aaPredicted RBP12.11□□□□□ -0.47
VCX3A-202ENST00000398729 TUBBP07437 444 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 NGFRP08138 427 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 HPGDP15428 266 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 KLK2P20151 261 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 TBXA2RP21731 343 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 LCN1P31025 176 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 DIO3P55073 304 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 SORDQ00796 357 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 LASP1Q14847 261 aaKnown RBP12.11□□□□□ -0.47
VCX3A-202ENST00000398729 CHI3L2Q15782 390 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 CEP85LQ5SZL2 805 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 FIGNL1Q6PIW4 674 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 PLXDC2Q6UX71 529 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 APOOLQ6UXV4 268 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 GALNT10Q86SR1 603 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 CROCCP2Q86T23 111 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 GCNT2Q8N0V5 402 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 OR4C3Q8NH37 302 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 FAM110BQ8TC76 370 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 OR5P2Q8WZ92 322 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 COQ8BQ96D53 544 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 CHMP6Q96FZ7 201 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 C16orf58Q96GQ5 468 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 ZIM3Q96PE6 472 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 STACQ99469 402 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 YIPF4Q9BSR8 244 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 PIGMQ9H3S5 423 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 DLL4Q9NR61 685 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 UBQLN4Q9NRR5 601 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 DNAJB12Q9NXW2 375 aaKnown RBP12.11□□□□□ -0.47
VCX3A-202ENST00000398729 ZNF337Q9Y3M9 751 aa12.11□□□□□ -0.47
VCX3A-202ENST00000398729 PCNX3Q9H6A9 2034 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 OR2M5A3KFT3 312 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 SLC22A20A6NK97 555 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 SEC14L5O43304 696 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 GMFGO60234 142 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 SNUPNO95149 360 aaKnown RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 TGM6O95932 706 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 HMGN2P05204 90 aaKnown RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 MYZAPP0CAP1 466 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 G6PDP11413 515 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 CPA2P48052 419 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 CCT3P49368 545 aaKnown RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 ABCE1P61221 599 aaKnown RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 POU6F2P78424 691 aaPredicted RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 EMX2Q04743 252 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 PDCD2Q16342 344 aaPredicted RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 SMU1Q2TAY7 513 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 SPDYE7PQ495Y7 208 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 EXOSC6Q5RKV6 272 aaKnown RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 OR2A2Q6IF42 318 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 ZAR1Q86SH2 424 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 LUZP2Q86TE4 346 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 KIRREL3Q8IZU9 778 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 KRTCAP2Q8N6L1 136 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 ZNF781Q8N8C0 355 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 OR56A1Q8NGH5 318 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 OR5M1Q8NGP8 315 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 PSMA8Q8TAA3 256 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 OTUB1Q96FW1 271 aaPredicted RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 GPATCH1Q9BRR8 931 aaKnown RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 RBM24Q9BX46 236 aaKnown RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 BTBD2Q9BX70 525 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 POLDIP3Q9BY77 421 aaKnown RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 BHLHE41Q9C0J9 482 aaPredicted RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 NEUROD4Q9HD90 331 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 DUSP22Q9NRW4 184 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 RASSF1Q9NS23 344 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 GIN1Q9NXP7 522 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 NOP53Q9NZM5 478 aaKnown RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 STOML1Q9UBI4 398 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 FAF1Q9UNN5 650 aaPredicted RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.1□□□□□ -0.47
VCX3A-202ENST00000398729 AP4B1Q9Y6B7 739 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 MED12LQ86YW9 2145 aa12.1□□□□□ -0.47
VCX3A-202ENST00000398729 A0A087WZY1 265 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 A6NNC1 897 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 ESPNB1AK53 854 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 SCDO00767 359 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 CFLARO15519 480 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 TNFRSF21O75509 655 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 SOX30O94993 753 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 C6orf47O95873 294 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 CRHP06850 196 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 KRT16P08779 473 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 DHRS4L1P0CG22 281 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 EPXP11678 715 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 ZNF17P17021 662 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 ATP6V1C1P21283 382 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 SLC1A6P48664 564 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 SUCLG1P53597 346 aaKnown RBP12.09□□□□□ -0.47
VCX3A-202ENST00000398729 CLDN8P56748 225 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 RPS3AP61247 264 aaKnown RBP12.09□□□□□ -0.47
VCX3A-202ENST00000398729 TP53BP2Q13625 1128 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 CCNJQ5T5M9 372 aa12.09□□□□□ -0.47
VCX3A-202ENST00000398729 CDC73Q6P1J9 531 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms