RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 LIFP15018 202 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 LYPD8Q6UX82 237 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 DEF8Q6ZN54 512 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 RAB43Q86YS6 212 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 ZNF614Q8N883 585 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 PHF10Q8WUB8 498 aaKnown RBP25.29■■□□□ 1.64
CPNE1-203ENST00000397442 OIT3Q8WWZ8 545 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 KLHL4Q9C0H6 718 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 COQ10BQ9H8M1 238 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 ACAD8Q9UKU7 415 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 DTNAQ9Y4J8 743 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 U3KQV3 271 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 PDLIM1O00151 329 aa25.28■■□□□ 1.64
CPNE1-203ENST00000397442 UGT2B11O75310 529 aa25.28■■□□□ 1.64
CPNE1-203ENST00000397442 OXSR1O95747 527 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-203ENST00000397442 ZNF26P17031 533 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-203ENST00000397442 TBXA2RP21731 343 aa25.28■■□□□ 1.64
CPNE1-203ENST00000397442 RRM2P31350 389 aa25.28■■□□□ 1.64
CPNE1-203ENST00000397442 KRT20P35900 424 aa25.28■■□□□ 1.64
CPNE1-203ENST00000397442 ATP1A4Q13733 1029 aa25.28■■□□□ 1.64
CPNE1-203ENST00000397442 APOOLQ6UXV4 268 aa25.28■■□□□ 1.64
CPNE1-203ENST00000397442 TAGAPQ8N103 731 aa25.28■■□□□ 1.64
CPNE1-203ENST00000397442 SLC29A1Q99808 456 aa25.28■■□□□ 1.64
CPNE1-203ENST00000397442 TACO1Q9BSH4 297 aaKnown RBP25.28■■□□□ 1.64
CPNE1-203ENST00000397442 ST6GALNAC1Q9NSC7 600 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-203ENST00000397442 TESMINQ9Y4I5 508 aa25.28■■□□□ 1.64
CPNE1-203ENST00000397442 MAGED1Q9Y5V3 778 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-203ENST00000397442 OR6C70A6NIJ9 312 aa25.27■■□□□ 1.64
CPNE1-203ENST00000397442 PPM1BO75688 479 aa25.27■■□□□ 1.64
CPNE1-203ENST00000397442 OR2J2O76002 312 aa25.27■■□□□ 1.64
CPNE1-203ENST00000397442 ITGAMP11215 1152 aa25.27■■□□□ 1.64
CPNE1-203ENST00000397442 ZNF23P17027 643 aa25.27■■□□□ 1.64
CPNE1-203ENST00000397442 ZNF136P52737 540 aa25.27■■□□□ 1.64
CPNE1-203ENST00000397442 FNDC7Q5VTL7 733 aa25.27■■□□□ 1.64
CPNE1-203ENST00000397442 GRAMD2AQ8IUY3 354 aa25.27■■□□□ 1.64
CPNE1-203ENST00000397442 CNOT9Q92600 299 aaKnown RBP25.27■■□□□ 1.64
CPNE1-203ENST00000397442 KIAA1143Q96AT1 154 aaPredicted RBP25.27■■□□□ 1.64
CPNE1-203ENST00000397442 PRR14Q9BWN1 585 aa25.27■■□□□ 1.64
CPNE1-203ENST00000397442 A4GNTQ9UNA3 340 aa25.27■■□□□ 1.64
CPNE1-203ENST00000397442 FAM32AQ9Y421 112 aaKnown RBP25.27■■□□□ 1.64
CPNE1-203ENST00000397442 FREM2Q5SZK8 3169 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 SERINC4A6NH21 518 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 SOCS2O14508 198 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 ICAM2P13598 275 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 RGS8P57771 180 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-203ENST00000397442 HOXC5Q00444 222 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 FOXC1Q12948 553 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 TBPL2Q6SJ96 375 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 ARMC10Q8N2F6 343 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 NXPE2Q96DL1 559 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 ZBTB20Q9HC78 741 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-203ENST00000397442 DNAJB12Q9NXW2 375 aaKnown RBP25.26■■□□□ 1.63
CPNE1-203ENST00000397442 LYVE1Q9Y5Y7 322 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 ADAMDEC1O15204 470 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 NGFRP08138 427 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 PRG2P13727 222 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 NAGAP17050 411 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 GANABQ14697 944 aaKnown RBP25.26■■□□□ 1.63
CPNE1-203ENST00000397442 CMIPQ8IY22 773 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 HS3ST5Q8IZT8 346 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 CBR4Q8N4T8 237 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 CATSPER1Q8NEC5 780 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 RASL10BQ96S79 203 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 C9orf16Q9BUW7 83 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 ARMC7Q9H6L4 198 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 REEP1Q9H902 201 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 ACER3Q9NUN7 267 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 RHCGQ9UBD6 479 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 WASF3Q9UPY6 502 aa25.26■■□□□ 1.63
CPNE1-203ENST00000397442 SAMHD1Q9Y3Z3 626 aaKnown RBP25.26■■□□□ 1.63
CPNE1-203ENST00000397442 MAN1A2O60476 641 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 ADH7P40394 386 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 PIN1Q13526 163 aaPredicted RBP25.25■■□□□ 1.63
CPNE1-203ENST00000397442 CD226Q15762 336 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 PPP4R4Q6NUP7 873 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 ZBTB49Q6ZSB9 765 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 VASH2Q86V25 355 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 ZNF527Q8NB42 609 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 OR4C15Q8NGM1 316 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 OR5K1Q8NHB7 308 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 DHRS1Q96LJ7 313 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 BARD1Q99728 777 aaKnown RBP25.25■■□□□ 1.63
CPNE1-203ENST00000397442 RTN4RQ9BZR6 473 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 VCX3BQ9H321 246 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 PRDM4Q9UKN5 801 aa25.25■■□□□ 1.63
CPNE1-203ENST00000397442 ADAM11O75078 769 aa25.24■■□□□ 1.63
CPNE1-203ENST00000397442 E2F6O75461 281 aa25.24■■□□□ 1.63
CPNE1-203ENST00000397442 GKN3PP0CG01 181 aa25.24■■□□□ 1.63
CPNE1-203ENST00000397442 DNAJA1P31689 397 aaKnown RBP25.24■■□□□ 1.63
CPNE1-203ENST00000397442 LIMS1P48059 325 aa25.24■■□□□ 1.63
CPNE1-203ENST00000397442 FBXW4P57775 412 aa25.24■■□□□ 1.63
CPNE1-203ENST00000397442 SPIBQ01892 262 aa25.24■■□□□ 1.63
CPNE1-203ENST00000397442 CHAF1BQ13112 559 aa25.24■■□□□ 1.63
CPNE1-203ENST00000397442 SRSF6Q13247 344 aaKnown RBP25.24■■□□□ 1.63
CPNE1-203ENST00000397442 SHQ1Q6PI26 577 aaKnown RBP25.24■■□□□ 1.63
CPNE1-203ENST00000397442 SVOPLQ8N434 492 aa25.24■■□□□ 1.63
CPNE1-203ENST00000397442 SLC22A8Q8TCC7 542 aa25.24■■□□□ 1.63
CPNE1-203ENST00000397442 HGDQ93099 445 aa25.24■■□□□ 1.63
CPNE1-203ENST00000397442 EPYCQ99645 322 aa25.24■■□□□ 1.63
CPNE1-203ENST00000397442 NMNAT1Q9HAN9 279 aaPredicted RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms