RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 MRPL43Q8N983 215 aaKnown RBP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 OR5K2Q8NHB8 316 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 TP63Q9H3D4 680 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 UBQLN4Q9NRR5 601 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 GPR160Q9UJ42 338 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 STRCQ7RTU9 1775 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 TOGARAM1Q9Y4F4 1720 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 TDRD15B5MCY1 1934 aaKnown RBP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 SRPX2O60687 465 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 ATP6V1G1O75348 118 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 SLC2A5P22732 501 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 PRLHRP49683 370 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 CDK3Q00526 305 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 SRYQ05066 204 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 GPR176Q14439 515 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 TMEM151BQ8IW70 566 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 CNTN4Q8IWV2 1026 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 TXNDC15Q96J42 360 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 CACNG6Q9BXT2 260 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 LIN28AQ9H9Z2 209 aaKnown RBP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 ACTR10Q9NZ32 417 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 EMC3Q9P0I2 261 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 GHRLQ9UBU3 117 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 PCBD1P61457 104 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 NFATC3Q12968 1075 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 CWH43Q9H720 699 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 GPR52Q9Y2T5 361 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 PRAF2O60831 178 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 TOXO94900 526 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 TMEM225BP0DP42 221 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 CD34P28906 385 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 DSC1Q08554 894 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF616Q08AN1 781 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 MEF2DQ14814 521 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 FAM205BPQ63HN1 556 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 TMEM150AQ86TG1 271 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 TRIM73Q86UV7 250 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF695Q8IW36 515 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 CHST14Q8NCH0 376 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 GALNT6Q8NCL4 622 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 LSM14AQ8ND56 463 aaKnown RBP5.14□□□□□ -1.59
VPS13C-204ENST00000395898 OR9A2Q8NGT5 310 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 FNDC8Q8TC99 324 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 SLC2A12Q8TD20 617 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 CDC6Q99741 560 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 TIMM29Q9BSF4 260 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 PCDHGA6Q9Y5G7 932 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 PRSS38A1L453 326 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 CDHR4A6H8M9 788 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 MYADML2A6NDP7 307 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 D6RAR5 112 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 SMAD9O15198 467 aaKnown RBP5.14□□□□□ -1.59
VPS13C-204ENST00000395898 SEC14L5O43304 696 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 PPP1R3DO95685 299 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 CPNE6O95741 557 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 HOXA9P31269 272 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 DLSTP36957 453 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 DCAF7P61962 342 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 SIM1P81133 766 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-204ENST00000395898 ATXN7L3Q14CW9 347 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-204ENST00000395898 PLAG1Q6DJT9 500 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 TMEM53Q6P2H8 277 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 ASCC1Q8N9N2 400 aaKnown RBP5.14□□□□□ -1.59
VPS13C-204ENST00000395898 ASB17Q8WXJ9 295 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 TCTN2Q96GX1 697 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF300Q96RE9 604 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-204ENST00000395898 OR10A5Q9H207 317 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 OR10A2Q9H208 303 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 CDH20Q9HBT6 801 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF160Q9HCG1 818 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 REV1Q9UBZ9 1251 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 NME4O00746 187 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 LCATP04180 440 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 INHBCP55103 352 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 CAV3P56539 151 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF542PQ5EBM4 170 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 HACD4Q5VWC8 232 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 OR4N5Q8IXE1 308 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 C12orf76Q8N812 135 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-204ENST00000395898 GLYATL2Q8WU03 294 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 CNOT9Q92600 299 aaKnown RBP5.14□□□□□ -1.59
VPS13C-204ENST00000395898 PRRT1Q99946 306 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 C7orf50Q9BRJ6 194 aaKnown RBP5.14□□□□□ -1.59
VPS13C-204ENST00000395898 CPNE7Q9UBL6 633 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 ERVK-19Q9WJR5 959 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 PLSCR5A0PG75 271 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 TRIM64CA6NLI5 447 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 ETV6P41212 452 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 FAM198BQ6UWH4 519 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 RNF113BQ8IZP6 322 aaKnown RBP5.14□□□□□ -1.59
VPS13C-204ENST00000395898 MSANTD3Q96H12 275 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 SAMD8Q96LT4 415 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 BEX2Q9BXY8 128 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 NMNAT1Q9HAN9 279 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-204ENST00000395898 BEX1Q9HBH7 125 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 POLE4Q9NR33 117 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 SDHAF2Q9NX18 166 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 ANTXRLA6NF34 631 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 GABBR2O75899 941 aa5.14□□□□□ -1.59
VPS13C-204ENST00000395898 CSF1P09603 554 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms