RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 BHLHE41Q9C0J9 482 aaPredicted RBP10.42□□□□□ -0.74
CUX1-204ENST00000393824 OR51B5Q9H339 312 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 FGF20Q9NP95 211 aaPredicted RBP10.42□□□□□ -0.74
CUX1-204ENST00000393824 C1GALT1Q9NS00 363 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 NUDT15Q9NV35 164 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 NPTNQ9Y639 398 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 SESN1Q9Y6P5 492 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 IGLV3-16A0A075B6K0 115 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 TEX13CA0A0J9YWL9 993 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 A0A1W2PQU0 124 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 TMEM202A6NGA9 273 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 A8MXK9 166 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 H0Y8X5 98 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 H0YIV9 168 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 M0R233 179 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 LANCL1O43813 399 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 PRAMEF4O60810 478 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 RECKO95980 971 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 IDSP22304 550 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 AHCYP23526 432 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 PCBP3P57721 371 aaKnown RBP10.42□□□□□ -0.74
CUX1-204ENST00000393824 NTRK2Q16620 822 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 EOGTQ5NDL2 527 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 COX20Q5RI15 118 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 PLEKHS1Q5SXH7 462 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 OR2G6Q5TZ20 316 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 PRAMEF9Q5VWM5 478 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 BHLHB9Q6PI77 547 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 SYT13Q7L8C5 426 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 PRICKLE2Q7Z3G6 844 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 TRMT11Q7Z4G4 463 aaKnown RBP10.42□□□□□ -0.74
CUX1-204ENST00000393824 KLHDC8AQ8IYD2 350 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 OR52N2Q8NGI0 321 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 OR8K3Q8NH51 312 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 FGF11Q92914 225 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 NUS1Q96E22 293 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 ERMAPQ96PL5 475 aaPredicted RBP10.42□□□□□ -0.74
CUX1-204ENST00000393824 DPYSL5Q9BPU6 564 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 ARHGAP9Q9BRR9 750 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 DPAGT1Q9H3H5 408 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 CYSLTR2Q9NS75 346 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 OR1A2Q9Y585 309 aa10.42□□□□□ -0.74
CUX1-204ENST00000393824 TRAV6A0A075B6T7 132 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 TRBV4-1A0A0J9YWV2 114 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 TRBC2A0A5B9 178 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 SLC22A23A1A5C7 686 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 OR2AG2A6NM03 316 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 PRSS44E7EML9 344 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 FFAR1O14842 300 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 LRRTM2O43300 516 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 PRKYO43930 277 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 IFNW1P05000 195 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 PROS1P07225 676 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 IGFBP1P08833 259 aaPredicted RBP10.41□□□□□ -0.74
CUX1-204ENST00000393824 PEPDP12955 493 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 ELK1P19419 428 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 ITPKAP23677 461 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 CCR7P32248 378 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 DCDC1P59894 354 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 EFNB1P98172 346 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 IRF8Q02556 426 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 ZNF630Q2M218 657 aaPredicted RBP10.41□□□□□ -0.74
CUX1-204ENST00000393824 CYP27C1Q4G0S4 372 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 SYT14P1Q58G82 188 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 FAM209BQ5JX69 171 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 ZDHHC20Q5W0Z9 365 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 RGS7BPQ6MZT1 257 aaPredicted RBP10.41□□□□□ -0.74
CUX1-204ENST00000393824 ABCA7Q8IZY2 2146 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 OXR1Q8N573 874 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 LILRA3Q8N6C8 439 aaPredicted RBP10.41□□□□□ -0.74
CUX1-204ENST00000393824 NFKBIDQ8NI38 313 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 CXorf40AQ8TE69 158 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 ZNF416Q9BWM5 594 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 NLNQ9BYT8 704 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 PCDHB16Q9NRJ7 776 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 EMC3Q9P0I2 261 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 RHCGQ9UBD6 479 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 GULP1Q9UBP9 304 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 EXTL2Q9UBQ6 330 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 CYP8B1Q9UNU6 501 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 SLC22A14Q9Y267 594 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 TBC1D3DA0A087WVF3 549 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 TBC1D3IA0A087WXS9 549 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 TBC1D3EA0A087X179 549 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 TBC1D3KA0A087X1G2 549 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 SHISA3A0PJX4 238 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 IRGMA1A4Y4 181 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 TBC1D3FA6NER0 549 aaPredicted RBP10.41□□□□□ -0.74
CUX1-204ENST00000393824 TBC1D3LB9A6J9 549 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 FAM227AF5H4B4 570 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 G3V3Q6 166 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 H3BN98 237 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 SLC31A1O15431 190 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 TLX2O43763 284 aaPredicted RBP10.41□□□□□ -0.74
CUX1-204ENST00000393824 SOX14O95416 240 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 TCRBP04435 133 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 HLA-DPB1P04440 258 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 PCCBP05166 539 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 TBC1D3HP0C7X1 549 aa10.41□□□□□ -0.74
CUX1-204ENST00000393824 TFPIP10646 304 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms