RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 SNPHO15079 494 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 ICOSLGO75144 302 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 PRPS1L1P21108 318 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 CPOXP36551 454 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 SRYQ05066 204 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 BST1Q10588 318 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 CASP8Q14790 479 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 ACKR1Q16570 336 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 DECR1Q16698 335 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 SMU1Q2TAY7 513 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 CYP27C1Q4G0S4 372 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 ADGRE4PQ86SQ3 457 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 GCNT2Q8N0V5 402 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 OR7A2PQ8NGA2 310 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 OR4N2Q8NGD1 307 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 OR14L1PQ8NHC6 308 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 CEP70Q8NHQ1 597 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 DTNBP1Q96EV8 351 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 CCL19Q99731 98 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 LMF2Q9BU23 707 aaKnown RBP17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 C20orf27Q9GZN8 174 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 ASIC5Q9NY37 505 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 ZNF226Q9NYT6 803 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 HAO1Q9UJM8 370 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 PACSIN3Q9UKS6 424 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 NINQ8N4C6 2090 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 CHMP24386 653 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 PTGDSP41222 190 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 SLC18A1P54219 525 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 PRKAG1P54619 331 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 PSMD4P55036 377 aaKnown RBP17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 EMX2Q04743 252 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 VPS26BQ4G0F5 336 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 CPTPQ5TA50 214 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 NATD1Q8N6N6 113 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 NUP43Q8NFH3 380 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 TLCD1Q96CP7 247 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 PERPQ96FX8 193 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 UBTD1Q9HAC8 227 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 MAPRE3Q9UPY8 281 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 WIF1Q9Y5W5 379 aa17.34■□□□□ 0.37
TRAPPC3-204ENST00000373166 FBN1P35555 2871 aaKnown RBP17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 A0A1W2PRB8 838 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 C2orf72A6NCS6 295 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 TRIM64A6NGJ6 449 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 TRIM64BA6NI03 449 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 MSTNO14793 375 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 EMC8O43402 210 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 CBR3O75828 277 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 G6PDP11413 515 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 EFNA1P20827 205 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 WDR4P57081 412 aaKnown RBP17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 PRR5P85299 388 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 MLC1Q15049 377 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 TRIM42Q8IWZ5 723 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 CDRT4Q8N9R6 151 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 WFIKKN1Q96NZ8 548 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 AKTIPQ9H8T0 292 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 SERHLQ9NQF3 203 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 HIVEP2P31629 2446 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 CSPG4Q6UVK1 2322 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 KIAA1549Q9HCM3 1950 aa17.33■□□□□ 0.36
TRAPPC3-204ENST00000373166 DEFB108AA8MXU0 73 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 KCNH1O95259 989 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 LAMP1P11279 417 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 GABRA3P34903 492 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 EVI2BP34910 448 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 RFX3P48380 749 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 PCYT1AP49585 367 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 FAM27E3Q08E93 113 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 ATG16L1Q676U5 607 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 AAGABQ6PD74 315 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 PLXDC2Q6UX71 529 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 C20orf204Q6ZNR8 217 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 IFNEQ86WN2 208 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 GRAMD2AQ8IUY3 354 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 KRTCAP2Q8N6L1 136 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 RAB3IL1Q8TBN0 382 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 GPR151Q8TDV0 419 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 PIK3IP1Q96FE7 263 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 NUF2Q9BZD4 464 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 OR2B2Q9GZK3 357 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 ZCCHC3Q9NUD5 404 aaKnown RBP17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 KLHL28Q9NXS3 571 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 NTMQ9P121 344 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 CLCF1Q9UBD9 225 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 ABCG2Q9UNQ0 655 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 COL6A5A8TX70 2615 aa17.32■□□□□ 0.36
TRAPPC3-204ENST00000373166 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.31■□□□□ 0.36
TRAPPC3-204ENST00000373166 A0A1W2PNV4 684 aa17.31■□□□□ 0.36
TRAPPC3-204ENST00000373166 SCO2O43819 266 aa17.31■□□□□ 0.36
TRAPPC3-204ENST00000373166 TNFSF13O75888 250 aa17.31■□□□□ 0.36
TRAPPC3-204ENST00000373166 SMNDC1O75940 238 aaKnown RBP eCLIP17.31■□□□□ 0.363e-7■□□□□ 8.5
TRAPPC3-204ENST00000373166 IL33O95760 270 aa17.31■□□□□ 0.36
TRAPPC3-204ENST00000373166 PRIM2P49643 509 aa17.31■□□□□ 0.36
TRAPPC3-204ENST00000373166 CLK3P49761 638 aaKnown RBP17.31■□□□□ 0.36
TRAPPC3-204ENST00000373166 C21orf58P58505 322 aa17.31■□□□□ 0.36
TRAPPC3-204ENST00000373166 LSM12Q3MHD2 195 aaKnown RBP17.31■□□□□ 0.36
TRAPPC3-204ENST00000373166 AGBL2Q5U5Z8 902 aa17.31■□□□□ 0.36
TRAPPC3-204ENST00000373166 MFSD12Q6NUT3 480 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms