RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ADAMTS16Q8TE57 1224 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 C4orf36Q96KX1 117 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 PRDM9Q9NQV7 894 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 ABRACLQ9P1F3 81 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 GASTP01350 101 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 IFNA5P01569 189 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 AKAIN1P0CW23 69 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 CHRNB1P11230 501 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 S100PP25815 95 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 GABRA5P31644 462 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 MMP12P39900 470 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 SHC2P98077 582 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 PLCXD2Q0VAA5 305 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 ZNF709Q8N972 641 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 CDRT4Q8N9R6 151 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 OR8J2Q8NGG1 315 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 HAVCR2Q8TDQ0 301 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 OR52D1Q9H346 318 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 APMAPQ9HDC9 416 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 TAS2R16Q9NYV7 291 aa16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 MRPS17Q9Y2R5 130 aaKnown RBP16.15■□□□□ 0.18
PTP4A1-201ENST00000370651 LAMB4A4D0S4 1761 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 ZNF865P0CJ78 1059 aaPredicted RBP16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 RBMS1P29558 406 aaKnown RBP16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 SGCAQ16586 387 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 TBPL2Q6SJ96 375 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 LRRC56Q8IYG6 542 aaPredicted RBP16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 DCUN1D4Q92564 292 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 WDR77Q9BQA1 342 aaPredicted RBP16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 SERTAD3Q9UJW9 196 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 IER3IP1Q9Y5U9 82 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 A0A1W2PQU0 124 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 ZNF850A8MQ14 1090 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 HOXC5Q00444 222 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 RNF111Q6ZNA4 994 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 FAM83HQ6ZRV2 1179 aaPredicted RBP16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 TPRA1Q86W33 373 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 SMARCD2Q92925 531 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 PGAM5Q96HS1 289 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 UNKLQ9H9P5 680 aaKnown RBP16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 IL21RQ9HBE5 538 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 MAN2C1Q9NTJ4 1040 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 OR1A2Q9Y585 309 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 TSPAN15O95858 294 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 CERS1P27544 350 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 LIPAP38571 399 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 SGSHP51688 502 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 PRPS1P60891 318 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 MBTPS1Q14703 1052 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 OXA1LQ15070 435 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 PLK5Q496M5 336 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 ANKLE1Q8NAG6 615 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 OR5H2Q8NGV7 314 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 INPP5EQ9NRR6 644 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 ZNF226Q9NYT6 803 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 USP36Q9P275 1121 aaKnown RBP16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 TRBV4-1A0A0J9YWV2 114 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 B8ZZF3 427 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 OR8U9P0C7N5 309 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 RRAS2P62070 204 aaPredicted RBP16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 ZNF529Q6P280 563 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 IL20RBQ6UXL0 311 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 MAMDC2Q7Z304 686 aaPredicted RBP16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 SDR9C7Q8NEX9 313 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 KLHL15Q96M94 604 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 OR5M11Q96RB7 305 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 BIN3Q9NQY0 253 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 V9GY05 133 aa16.14■□□□□ 0.17
PTP4A1-201ENST00000370651 RAP2BP61225 183 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 MEPCEQ7L2J0 689 aaKnown RBP16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 OR56B4Q8NH76 319 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 ZNF736B4DX44 427 aaPredicted RBP16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 PLGP00747 810 aaPredicted RBP16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 APEX1P27695 318 aaKnown RBP16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 PSMB10P40306 273 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 DHCR24Q15392 516 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 SYPL1Q16563 259 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 GGTA1PQ4G0N0 100 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 HORMAD2Q8N7B1 307 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 KCTD12Q96CX2 325 aaKnown RBP16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 TXNL4BQ9NX01 149 aaKnown RBP16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 C9J4A7 227 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 NCR1O76036 304 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 MC2RQ01718 297 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 BPIFA2Q96DR5 249 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 RCE1Q9Y256 329 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 OR2A25A4D2G3 310 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 MYADML2A6NDP7 307 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 KCNK5O95279 499 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 EGFP01133 1207 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 PIM1P11309 404 aaPredicted RBP16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 BTN1A1Q13410 526 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 SF3B4Q15427 424 aaKnown RBP eCLIP16.13■□□□□ 0.171e-9■■□□□ 13.4
PTP4A1-201ENST00000370651 GKN2Q86XP6 184 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 ZNF619Q8N2I2 560 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 LMX1AQ8TE12 382 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 CDC6Q99741 560 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 METTL17Q9H7H0 456 aaPredicted RBP16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 SIAEQ9HAT2 523 aa16.13■□□□□ 0.17
PTP4A1-201ENST00000370651 A0A1B0GV50 99 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms