RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RPL3P39023 403 aaKnown RBP9.95□□□□□ -0.82
TPM3-212ENST00000368533 PTGES3Q15185 160 aaKnown RBP9.95□□□□□ -0.82
TPM3-212ENST00000368533 SYPL1Q16563 259 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 ZNF630Q2M218 657 aaPredicted RBP9.95□□□□□ -0.82
TPM3-212ENST00000368533 C10orf62Q5T681 223 aaPredicted RBP9.95□□□□□ -0.82
TPM3-212ENST00000368533 PLEKHM3Q6ZWE6 761 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 CDH24Q86UP0 819 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 SLC35F3Q8IY50 421 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 UBALD2Q8IYN6 164 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 CACTIN-AS1Q8N1I8 211 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 B3GNT7Q8NFL0 401 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 CADM4Q8NFZ8 388 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 WDR36Q8NI36 951 aaKnown RBP9.95□□□□□ -0.82
TPM3-212ENST00000368533 AMDHD1Q96NU7 426 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 BCL7BQ9BQE9 202 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 GABARAPL3Q9BY60 117 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 SERHL2Q9H4I8 314 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 SIRT3Q9NTG7 399 aaPredicted RBP9.95□□□□□ -0.82
TPM3-212ENST00000368533 TMEM229AB2RXF0 380 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 M0R082 166 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 LAMTOR5O43504 91 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 ALAS2P22557 587 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 CNR2P34972 360 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 ZNF45Q02386 682 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 FAPQ12884 760 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 TARDBPQ13148 414 aaKnown RBP eCLIP9.94□□□□□ -0.82
TPM3-212ENST00000368533 FADDQ13158 208 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 LYSMD4Q5XG99 296 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 ZC3H14Q6PJT7 736 aaKnown RBP9.94□□□□□ -0.82
TPM3-212ENST00000368533 GPR155Q7Z3F1 870 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 CYP4Z2PQ8N1L4 340 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 RCBTB1Q8NDN9 531 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 OR8H1Q8NGG4 311 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 ST8SIA2Q92186 375 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.94□□□□□ -0.82
TPM3-212ENST00000368533 MCCC2Q9HCC0 563 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 CLN6Q9NWW5 311 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 ZNF226Q9NYT6 803 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 GLTPQ9NZD2 209 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 NDOR1Q9UHB4 597 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 ENTPD4Q9Y227 616 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 HMX3A6NHT5 357 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 CLDN24A6NM45 220 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 PROM1O43490 865 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 GASTP01350 101 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 PDGFAP04085 211 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 NR2F6P10588 404 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 IL32P24001 234 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 LIM2P55344 173 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 ZXDAP98168 799 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 BNC1Q01954 994 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 RBBP4Q09028 425 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 TSTQ16762 297 aaKnown RBP9.94□□□□□ -0.82
TPM3-212ENST00000368533 REEP3Q6NUK4 255 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 CAMKMTQ7Z624 323 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 C19orf47Q8N9M1 422 aaKnown RBP9.94□□□□□ -0.82
TPM3-212ENST00000368533 SUN3Q8TAQ9 357 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 KLHL6Q8WZ60 621 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 ATOH1Q92858 354 aaPredicted RBP9.94□□□□□ -0.82
TPM3-212ENST00000368533 ZBED6CLQ96FA7 236 aaPredicted RBP9.94□□□□□ -0.82
TPM3-212ENST00000368533 COL21A1Q96P44 957 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 FAIM2Q9BWQ8 316 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 NT5DC2Q9H857 520 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 ACER3Q9NUN7 267 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 PILRAQ9UKJ1 303 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 PCDHGA2Q9Y5H1 932 aa9.94□□□□□ -0.82
TPM3-212ENST00000368533 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 C19orf67A6NJJ6 358 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 OR5K4A6NMS3 321 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 SHOXO15266 292 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 OR2B3O76000 313 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 HMGN2P05204 90 aaKnown RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 ADORA3P0DMS8 318 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 TNNI3P19429 210 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 PPP2R1BP30154 601 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 NTSP30990 170 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 SSTR4P31391 388 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 XKP51811 444 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 C21orf58P58505 322 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 TMEM35AQ53FP2 167 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 FAM111BQ6SJ93 734 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 PHC2Q8IXK0 858 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 GALNT11Q8NCW6 608 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 PEX11GQ96HA9 241 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 OR5M11Q96RB7 305 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 TM9SF2Q99805 663 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 WFDC6Q9BQY6 131 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 GTPBP2Q9BX10 602 aaKnown RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 OR51I1Q9H343 314 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 NMNAT1Q9HAN9 279 aaPredicted RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 DNAJC27Q9NZQ0 273 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 GMEB2Q9UKD1 530 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 POMT2Q9UKY4 750 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 ENPP4Q9Y6X5 453 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 A0A1W2PQ09 198 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 LMO7DNF2Z398 122 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 HRO43593 1189 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 B3GALT2O43825 422 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 SLC28A2O43868 658 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 IGFBP1P08833 259 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms