RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 TCTE3Q8IZS6 198 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 BANPQ8N9N5 519 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 SCCPDHQ8NBX0 429 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 NUP37Q8NFH4 326 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 OR1M1Q8NGA1 313 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 OR51D1Q8NGF3 324 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 FGF11Q92914 225 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 RAB3CQ96E17 227 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 APOLD1Q96LR9 279 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 KLHL15Q96M94 604 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 TAAR9Q96RI9 348 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 CCDC32Q9BV29 185 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 SORBS1Q9BX66 1292 aaKnown RBP8.17□□□□□ -1.1
SYNE1-206ENST00000367253 IL17BQ9UHF5 180 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 LOXL2Q9Y4K0 774 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 hCG_2039718K7EN88 272 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 CXCR6O00574 342 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 NOBOXO60393 691 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 RAD51DO75771 328 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 S1PR4O95977 384 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 PAX6P26367 422 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 GAS6Q14393 721 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF542PQ5EBM4 170 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 AADACL2Q6P093 401 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 SLC16A13Q7RTY0 426 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 CPNE9Q8IYJ1 553 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 TMEM130Q8N3G9 435 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF676Q8N7Q3 588 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 OR56A1Q8NGH5 318 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 SCGB1C1Q8TD33 95 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 OIT3Q8WWZ8 545 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 NT5C3BQ969T7 300 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 SLC35C1Q96A29 364 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 MOAP1Q96BY2 351 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 WFIKKN1Q96NZ8 548 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 C16orf70Q9BSU1 422 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 ENKD1Q9H0I2 346 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 AMBNQ9NP70 447 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 KCNS2Q9ULS6 477 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 FZD10Q9ULW2 581 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 SHANK3Q9BYB0 1731 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 C2orf92A0A1B0GVN3 265 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 ANKRD61A6NGH8 418 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 RFXAPO00287 272 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 ITM2AO43736 263 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 CSO75390 466 aaKnown RBP8.17□□□□□ -1.1
SYNE1-206ENST00000367253 CDRT1O95170 752 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 TACSTD2P09758 323 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF865P0CJ78 1059 aaPredicted RBP8.17□□□□□ -1.1
SYNE1-206ENST00000367253 BDKRB2P30411 391 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 PRPS1P60891 318 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 GRIK2Q13002 908 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 YOD1Q5VVQ6 348 aaPredicted RBP8.17□□□□□ -1.1
SYNE1-206ENST00000367253 KCTD20Q7Z5Y7 419 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 OR1N1Q8NGS0 311 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 COQ10AQ96MF6 247 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 TMEM109Q9BVC6 243 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 POLR2J3Q9H1A7 115 aaKnown RBP8.17□□□□□ -1.1
SYNE1-206ENST00000367253 SSU72Q9NP77 194 aaKnown RBP8.17□□□□□ -1.1
SYNE1-206ENST00000367253 OR2S2Q9NQN1 319 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 STUB1Q9UNE7 303 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 STRAPQ9Y3F4 350 aaKnown RBP8.17□□□□□ -1.1
SYNE1-206ENST00000367253 AQP7P3A6NL99 342 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 LRRN3E7EW58 273 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 BANF1O75531 89 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 GNB3P16520 340 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 GALP22466 123 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 MAP2K3P46734 347 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 PRRX1P54821 245 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 ACTG1P63261 375 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 DEFB103AP81534 67 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 SEMA5AQ13591 1074 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 CCNJQ5T5M9 372 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 VHLLQ6RSH7 139 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 KANSL1Q7Z3B3 1105 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF781Q8N8C0 355 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 OR4K14Q8NGD5 310 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 TMEM171Q8WVE6 324 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 TWIST2Q8WVJ9 160 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 SMIM3Q9BZL3 60 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 NCOR1P1Q9H4R4 102 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 CENPMQ9NSP4 180 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 GPR83Q9NYM4 423 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 HSFX1Q9UBD0 423 aa8.17□□□□□ -1.1
SYNE1-206ENST00000367253 HAS3O00219 553 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 GPR171O14626 319 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 IMPA2O14732 288 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 TERTO14746 1132 aaKnown RBP8.16□□□□□ -1.1
SYNE1-206ENST00000367253 ATP1B2P14415 290 aaPredicted RBP8.16□□□□□ -1.1
SYNE1-206ENST00000367253 CKMT2P17540 419 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 PTBP1P26599 531 aaKnown RBP eCLIP8.16□□□□□ -1.1
SYNE1-206ENST00000367253 POLR2HP52434 150 aaKnown RBP8.16□□□□□ -1.1
SYNE1-206ENST00000367253 RPS24P62847 133 aaKnown RBP8.16□□□□□ -1.1
SYNE1-206ENST00000367253 PEA15Q15121 130 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 FRMPD2BQ6IN97 320 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 PRR27Q6MZM9 219 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 UGT2A3Q6UWM9 527 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 C17orf107Q6ZR85 190 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 SH3RF1Q7Z6J0 888 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 TAC4Q86UU9 113 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms