RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 CASQ1P31415 396 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 CLK1P49759 484 aaKnown RBP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 PHEXP78562 749 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 POU4F1Q01851 419 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 HLA-DQA1Q5Y7H0 255 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZCCHC12Q6PEW1 402 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 RHOUQ7L0Q8 258 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 WFDC8Q8IUA0 241 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 OR2L13Q8N349 312 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 OR4F15Q8NGB8 312 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.22□□□□□ -1.573e-8■■■■■ 39.1
CDC42SE2-201ENST00000360515 PPWD1Q96BP3 646 aaKnown RBP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 METTL2AQ96IZ6 378 aaKnown RBP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 SORCS2Q96PQ0 1159 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 INPP5KQ9BT40 448 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF385DQ9H6B1 395 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 PTGES2Q9H7Z7 377 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 GALNT9Q9HCQ5 603 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 NKIRAS2Q9NYR9 191 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 AKAP6Q13023 2319 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 CCDC188H7C350 402 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 WDR47O94967 919 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 SESN2P58004 480 aaPredicted RBP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 GPX6P59796 221 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 RAC3P60763 192 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 PSG6Q00889 435 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 RNASEH2BQ5TBB1 312 aaKnown RBP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 C1orf229Q6ZS94 237 aaPredicted RBP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF627Q7L945 461 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 CNEP1R1Q8N9A8 125 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 FAM76AQ8TAV0 307 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 POP5Q969H6 163 aaKnown RBP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 MRPL24Q96A35 216 aaKnown RBP5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 MRGPRX4Q96LA9 322 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 ATOH8Q96SQ7 321 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 TMPRSS13Q9BYE2 586 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 MED4Q9NPJ6 270 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 ESM1Q9NQ30 184 aa5.22□□□□□ -1.57
CDC42SE2-201ENST00000360515 A8MXK9 166 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 GOLGA6L22H0YM25 854 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 ENPP1P22413 925 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 PIK3R1P27986 724 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 PIK3CGP48736 1102 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 CTBP2P56545 445 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 CHMP1BQ7LBR1 199 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 TMEM139Q8IV31 216 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 BANPQ8N9N5 519 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 DENND2DQ9H6A0 471 aaPredicted RBP5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 FOLH1BQ9HBA9 442 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 TIGARQ9NQ88 270 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 GRHL1Q9NZI5 618 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 OPN4Q9UHM6 478 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 C19orf53Q9UNZ5 99 aaPredicted RBP5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 PLLPQ9Y342 182 aa5.21□□□□□ -1.57
CDC42SE2-201ENST00000360515 GOLGA6L6A8MZA4 724 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 K7EPI3 171 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 ULK1O75385 1050 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 EEDO75530 441 aaKnown RBP5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 LRATO95237 230 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 PNPP00491 289 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 ADAP00813 363 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 ETS1P14921 441 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 PLA2G16P53816 162 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 NAP1L1P55209 391 aaKnown RBP5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 LMO4P61968 165 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 CRADDP78560 199 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 RAB35Q15286 201 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 NUFIP2Q7Z417 695 aaKnown RBP5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 MNS1Q8NEH6 495 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 HUS1BQ8NHY5 278 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 ZNF669Q96BR6 464 aaPredicted RBP5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 CERS2Q96G23 380 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 KLHL15Q96M94 604 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 JSRP1Q96MG2 331 aaPredicted RBP5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 FKRPQ9H9S5 495 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 JRKLQ9Y4A0 524 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 ARID1AO14497 2285 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 A0A0J9YW62 118 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 C5orf63A6NC05 138 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 ZNF716A6NP11 495 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 NPIPB9F8W1W9 429 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 RAMP1O60894 148 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 COQ9O75208 318 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 RP2O75695 350 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 ALX3O95076 343 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 NKX2-2O95096 273 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 SYNGR4O95473 234 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 GSTA2P09210 222 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 SSR2P43308 183 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 H3F3AP84243 136 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 CES3Q6UWW8 571 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 CCDC89Q8N998 374 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 OR51F2Q8NH61 342 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 KIF18AQ8NI77 898 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 TMEM186Q96B77 213 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 FCRL1Q96LA6 429 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 WDR41Q9HAD4 459 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 IARS2Q9NSE4 1012 aaKnown RBP5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 KLRF1Q9NZS2 232 aa5.21□□□□□ -1.58
CDC42SE2-201ENST00000360515 IFNKQ9P0W0 207 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms