RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 OPN1LWP04000 364 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 MMP2P08253 660 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 CD63P08962 238 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 FBXO45P0C2W1 286 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 PTGER1P34995 402 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 ZNF140P52738 457 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 HAGHLQ6PII5 290 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 RTL10Q7L3V2 364 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 TRMT2BQ96GJ1 504 aaKnown RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 ZNF649Q9BS31 505 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 PITHD1Q9GZP4 211 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 RNF38Q9H0F5 515 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 CHRDQ9H2X0 955 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 SDR39U1Q9NRG7 319 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 DCDC2BA2VCK2 349 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 WASH4PA8MWX3 477 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 MPIG6BO95866 241 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 CHMP24386 653 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 ZNF616Q08AN1 781 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 B3GNT3Q9Y2A9 372 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 FUNDC2Q9BWH2 189 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 CXXC1Q9P0U4 656 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 PRSS21Q9Y6M0 314 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 NSG1A0A0A6YYJ2 146 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 ZNF705EA8MWA4 302 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 SERPINA5P05154 406 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 FGF4P08620 206 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 NPR2P20594 1047 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 C3orf38Q5JPI3 329 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 PXKQ7Z7A4 578 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 HLA-CQ95604 372 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 TOMM40LQ969M1 308 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 MAELQ96JY0 434 aaKnown RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 CACNG6Q9BXT2 260 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 CASC3O15234 703 aaKnown RBP16.97■□□□□ 0.31
COL18A1-202ENST00000355480 RETP07949 1114 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 MFSD6LQ8IWD5 586 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 TMEFF1Q8IYR6 380 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 EID2Q8N6I1 236 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 NXF5Q9H1B4 397 aaKnown RBP16.97■□□□□ 0.31
COL18A1-202ENST00000355480 CA5BQ9Y2D0 317 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 PCDHGA7Q9Y5G6 932 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 TNFSF4P23510 183 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 CDK2P24941 298 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 IVDP26440 423 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 SGSHP51688 502 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 PRSS48Q7RTY5 328 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 TIMM29Q9BSF4 260 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 ZNF334Q9HCZ1 680 aaPredicted RBP16.97■□□□□ 0.31
COL18A1-202ENST00000355480 KNDC1Q76NI1 1749 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 HMX3A6NHT5 357 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 NUDT21O43809 227 aaKnown RBP16.97■□□□□ 0.31
COL18A1-202ENST00000355480 KNG1P01042 644 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 TFPTP0C1Z6 253 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 TGFBR3Q03167 851 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 NFATC4Q14934 902 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 SLC16A9Q7RTY1 509 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 CCDC71LQ8N9Z2 235 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 CCR7P32248 378 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 BDH1Q02338 343 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 LANCL3Q6ZV70 420 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 LILRB2Q8N423 598 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 TAAR2Q9P1P5 351 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 DLG5Q8TDM6 1919 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 RAB3AP20336 220 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 PSMB5P28074 263 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 AGTR1P30556 359 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 AADACL4Q5VUY2 407 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 DPY19L4Q7Z388 723 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 WDR53Q7Z5U6 358 aaPredicted RBP16.97■□□□□ 0.31
COL18A1-202ENST00000355480 DTWD1Q8N5C7 304 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 RAB9BQ9NP90 201 aa16.97■□□□□ 0.31
COL18A1-202ENST00000355480 LRRC37A3O60309 1634 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 ERVK-16P61578 105 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 NKPD1Q17RQ9 610 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 ENKD1Q9H0I2 346 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 PCDHB10Q9UN67 800 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 BCAT2O15382 392 aaPredicted RBP16.96■□□□□ 0.31
COL18A1-202ENST00000355480 EPHA1P21709 976 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 HTR2AP28223 471 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 TM4SF4P48230 202 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 ERVK-25P63136 954 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 METTL25Q8N6Q8 603 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 ACPTQ9BZG2 426 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 HCSTQ9UBK5 93 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 AP1M2Q9Y6Q5 423 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 BAZ2AQ9UIF9 1905 aaKnown RBP16.96■□□□□ 0.31
COL18A1-202ENST00000355480 GJA4P35212 333 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 OR5W2Q8NH69 310 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 SLC2A12Q8TD20 617 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 HCAR1Q9BXC0 346 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 INIPQ9NRY2 104 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 PLEKHJ1Q9NW61 149 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 CBLCQ9ULV8 474 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 A0A1B0GV50 99 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 FAM230AA0A1W2PPH8 454 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 RPS17P08708 135 aaKnown RBP16.96■□□□□ 0.31
COL18A1-202ENST00000355480 F3P13726 295 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 HTR3AP46098 478 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms