RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 EOGTQ5NDL2 527 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 ASB18Q6ZVZ8 466 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 C6orf120Q7Z4R8 191 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 SLITRK4Q8IW52 837 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 SFTPA1Q8IWL2 248 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 SMRP1Q8NCR6 262 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 OSTF1Q92882 214 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 NUS1Q96E22 293 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 TOE1Q96GM8 510 aaKnown RBP14.84□□□□□ -0.03
HMGA1-202ENST00000347617 SGPP1Q9BX95 441 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 TMEM168Q9H0V1 697 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 BCL2L10Q9HD36 194 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 EVA1BQ9NVM1 165 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 CLDND1Q9NY35 253 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 MTCH2Q9Y6C9 303 aa14.84□□□□□ -0.03
HMGA1-202ENST00000347617 TCF20Q9UGU0 1960 aaKnown RBP14.84□□□□□ -0.03
HMGA1-202ENST00000347617 SLC5A10A0PJK1 596 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 RNF13O43567 381 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 ATG13O75143 517 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 KLHL18O94889 574 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 SLC16A8O95907 504 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 KLK1P06870 262 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 C6P13671 934 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 HTR1FP30939 366 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 P2RY2P41231 377 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 STAT5AP42229 794 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 FRKP42685 505 aaPredicted RBP14.83□□□□□ -0.03
HMGA1-202ENST00000347617 KIR2DL1P43626 348 aaPredicted RBP14.83□□□□□ -0.03
HMGA1-202ENST00000347617 MMP15P51511 669 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 MANFP55145 182 aaKnown RBP14.83□□□□□ -0.03
HMGA1-202ENST00000347617 MADCAM1Q13477 382 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 MLC1Q15049 377 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 SPDYE7PQ495Y7 208 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 AADACL4Q5VUY2 407 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 PRAMEF8Q5VWM4 474 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 PRAMEF7Q5VXH5 474 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 ADNP2Q6IQ32 1131 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 TNFAIP8L2Q6P589 184 aaPredicted RBP14.83□□□□□ -0.03
HMGA1-202ENST00000347617 ZNF322Q6U7Q0 402 aaPredicted RBP14.83□□□□□ -0.03
HMGA1-202ENST00000347617 TMEM91Q6ZNR0 172 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 OVCH2Q7RTZ1 564 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 TOMM5Q8N4H5 51 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.83□□□□□ -0.03
HMGA1-202ENST00000347617 OR4D11Q8NGI4 311 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 SETD7Q8WTS6 366 aaKnown RBP14.83□□□□□ -0.03
HMGA1-202ENST00000347617 SMPDL3AQ92484 453 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 LINC00615Q96LM1 132 aaPredicted RBP14.83□□□□□ -0.03
HMGA1-202ENST00000347617 DPYSL5Q9BPU6 564 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 RPP25Q9BUL9 199 aaKnown RBP14.83□□□□□ -0.03
HMGA1-202ENST00000347617 PRO3102Q9H379 93 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 CD93Q9NPY3 652 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 RDH8Q9NYR8 311 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 FAM8A1Q9UBU6 413 aa14.83□□□□□ -0.03
HMGA1-202ENST00000347617 MYO9BQ13459 2157 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 ANKRD61A6NGH8 418 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 K7EQS6 105 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 HMGN4O00479 90 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 TOR1AO14656 332 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 EEF1E1O43324 174 aaKnown RBP14.83□□□□□ -0.04
HMGA1-202ENST00000347617 GSTZ1O43708 216 aaPredicted RBP14.83□□□□□ -0.04
HMGA1-202ENST00000347617 VEGFDO43915 354 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 UBL3O95164 117 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 MPC2O95563 127 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 HMGN1P05114 100 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 OR12D1P0DN82 309 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 ENPP1P22413 925 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 TEAD1P28347 426 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 CTAG1AP78358 180 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 FOXD4Q12950 439 aaPredicted RBP14.83□□□□□ -0.04
HMGA1-202ENST00000347617 GSG1Q2KHT4 349 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 POM121L1PQ3SYA9 428 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 PIP5KL1Q5T9C9 394 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 NXPE4Q6UWF7 544 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 LHFPL3Q86UP9 236 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 GID4Q8IVV7 300 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 RASGEF1AQ8N9B8 481 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 OR2T4Q8NH00 348 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 CXorf40AQ8TE69 158 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 CACNG6Q9BXT2 260 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 INPP5EQ9NRR6 644 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 MAN2C1Q9NTJ4 1040 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 ACSS1Q9NUB1 689 aaPredicted RBP14.83□□□□□ -0.04
HMGA1-202ENST00000347617 ACSL5Q9ULC5 683 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 GPR34Q9UPC5 381 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 CKAP5Q14008 2032 aa14.83□□□□□ -0.04
HMGA1-202ENST00000347617 TRAV6A0A075B6T7 132 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 C17orf113A0A1B0GUU1 675 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 CIB4A0PJX0 185 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 SHISA3A0PJX4 238 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 CTDSPLO15194 276 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 TGFB1P01137 390 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 SERPIND1P05546 499 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 SOX18P35713 384 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 NUP62P37198 522 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-202ENST00000347617 METAP1P53582 386 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 TAS2R43P59537 309 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 RPS7P62081 194 aaKnown RBP14.82□□□□□ -0.04
HMGA1-202ENST00000347617 TBPL1P62380 186 aa14.82□□□□□ -0.04
HMGA1-202ENST00000347617 PIN1Q13526 163 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-202ENST00000347617 SLC36A2Q495M3 483 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms