RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 SLC2A12Q8TD20 617 aa23.36■■□□□ 1.33
TRADD-201ENST00000345057 TRUB1Q8WWH5 349 aaKnown RBP23.36■■□□□ 1.33
TRADD-201ENST00000345057 CLIP3Q96DZ5 547 aa23.36■■□□□ 1.33
TRADD-201ENST00000345057 SIDT1Q9NXL6 827 aaKnown RBP23.36■■□□□ 1.33
TRADD-201ENST00000345057 COPS7AQ9UBW8 275 aa23.36■■□□□ 1.33
TRADD-201ENST00000345057 PCDHGB1Q9Y5G3 927 aa23.36■■□□□ 1.33
TRADD-201ENST00000345057 DLL1O00548 723 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 XPNPEP2O43895 674 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 IGKV3-11P04433 115 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 ATXN8OSP0DMR3 200 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 LAMA1P25391 3075 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 GSSP48637 474 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 SH3BGRP55822 239 aaPredicted RBP23.35■■□□□ 1.33
TRADD-201ENST00000345057 TUBA3CQ13748 450 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 PHF19Q5T6S3 580 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 MBOAT2Q6ZWT7 520 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 BCORP1Q8N888 145 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 OR4N2Q8NGD1 307 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 APH1BQ8WW43 257 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 PRR14Q9BWN1 585 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 YIPF3Q9GZM5 350 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 OR8D2Q9GZM6 311 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 VN1R1Q9GZP7 353 aa23.35■■□□□ 1.33
TRADD-201ENST00000345057 D6RAR5 112 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 IGKV1D-16P01601 117 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 CSTF2P33240 577 aaKnown RBP eCLIP23.34■■□□□ 1.33
TRADD-201ENST00000345057 KRT20P35900 424 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 HOXC5Q00444 222 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 TSPAN31Q12999 210 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 SLX4IPQ5VYV7 408 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 ZNF613Q6PF04 617 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 ZNF550Q7Z398 422 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 ZAR1Q86SH2 424 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 SLITRK4Q8IW52 837 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 SVOPQ8N4V2 548 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 ZNF614Q8N883 585 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 TMEM27Q9HBJ8 222 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 CEPT1Q9Y6K0 416 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 SH3D21A4FU49 640 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 FRG2CA6NGY1 282 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 OR6C76A6NM76 312 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 NPIPB9F8W1W9 429 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 NTN3O00634 580 aaPredicted RBP23.34■■□□□ 1.33
TRADD-201ENST00000345057 ONECUT2O95948 504 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 GP1BAP07359 652 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 AVPR2P30518 371 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 LCN1P31025 176 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 PSPHP78330 225 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 DCDP81605 110 aaKnown RBP23.34■■□□□ 1.33
TRADD-201ENST00000345057 FGFBP1Q14512 234 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 IL11RAQ14626 422 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 OR1Q1Q15612 314 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 NEDD8Q15843 81 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 NKAIN1Q4KMZ8 207 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 CASP12Q6UXS9 341 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 COX15Q7KZN9 410 aa23.34■■□□□ 1.33
TRADD-201ENST00000345057 RNF113BQ8IZP6 322 aaKnown RBP23.34■■□□□ 1.33
TRADD-201ENST00000345057 RSL24D1Q9UHA3 163 aaKnown RBP23.34■■□□□ 1.33
TRADD-201ENST00000345057 ZNF701M0R085 212 aaPredicted RBP23.33■■□□□ 1.33
TRADD-201ENST00000345057 RGS10O43665 173 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 LPAL2Q16609 132 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 PTCHD4Q6ZW05 846 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 ALDH16A1Q8IZ83 802 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 ZNF527Q8NB42 609 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 STT3BQ8TCJ2 826 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 ZNF721Q8TF20 911 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 TMIGD2Q96BF3 282 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 LCORQ96JN0 433 aaPredicted RBP23.33■■□□□ 1.33
TRADD-201ENST00000345057 Q96MT0 163 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 TSC22D3Q99576 134 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 TRIM2Q9C040 744 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 CCDC90BQ9GZT6 254 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 ZNF226Q9NYT6 803 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 SLC7A7Q9UM01 511 aa23.33■■□□□ 1.33
TRADD-201ENST00000345057 A8MUA0 341 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 DDAH2O95865 285 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 GABRB1P18505 474 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 FPR3P25089 353 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 MVKQ03426 396 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 PMS2P3Q13401 168 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 RAB39AQ14964 217 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 PWWP2BQ6NUJ5 590 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 UBE2FQ969M7 185 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 ARRDC1-AS1Q9H2J1 176 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 CLN6Q9NWW5 311 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 CTSFQ9UBX1 484 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 COMMD3-BMI1R4GMX3 469 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 H3BSA7 217 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 SOX14O95416 240 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 HTR1AP08908 422 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 ZGLP1P0C6A0 271 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 GKN3PP0CG01 181 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 STAT5AP42229 794 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 HLA-DQA1Q5Y7H0 255 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 C12orf73Q69YU5 71 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 RASSF6Q6ZTQ3 369 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 PRSS48Q7RTY5 328 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 NKAIN4Q8IVV8 208 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 MYDGFQ969H8 173 aa23.32■■□□□ 1.32
TRADD-201ENST00000345057 MYCBPQ99417 103 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms