RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 VSX2P58304 361 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 EEF1A1P68104 462 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 DAB2P98082 770 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 FABP5Q01469 135 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 INSL4Q14641 139 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 WDR88Q6ZMY6 472 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 USP53Q70EK8 1073 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 SAMD14Q8IZD0 417 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 KCTD7Q96MP8 289 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 DCLRE1CQ96SD1 692 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 ATP13A2Q9NQ11 1180 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 CLDND1Q9NY35 253 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 TBC1D24Q9ULP9 559 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 TMEM129A0AVI4 362 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 SGK494L7N484 410 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 TNFSF14O43557 240 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 HCRTR1O43613 425 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 AGR2O95994 175 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 CTSBP07858 339 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 CT62P0C5K7 136 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 TYRP1P17643 537 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 ZNF10P21506 573 aaPredicted RBP13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 HTR4Q13639 388 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 ZNF79Q15937 498 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 BAK1Q16611 211 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 PLK5Q496M5 336 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 FAM131AQ6UXB0 335 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 AKAP14Q86UN6 197 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 CPOQ8IVL8 374 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 POGLUT1Q8NBL1 392 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 OR2T33Q8NG76 320 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 ART5Q96L15 291 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 TBX5Q99593 518 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 TEX12Q9BXU0 123 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 ANKRD19PQ9H560 264 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 HINT3Q9NQE9 182 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 C20orf141Q9NUB4 165 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 IL20Q9NYY1 176 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 NTMQ9P121 344 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 CPNE7Q9UBL6 633 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 KCNE5Q9UJ90 142 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 EXOSC1Q9Y3B2 195 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 A0A1W2PQL4 384 aaPredicted RBP13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 GXYLT2A0PJZ3 443 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 AKT2P31751 481 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 C1orf61Q13536 156 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 AADACL4Q5VUY2 407 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 RANBP3LQ86VV4 465 aaPredicted RBP13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 RFKQ969G6 155 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 RIPOR3Q96MK2 946 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 SECISBP2Q96T21 854 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 CCDC32Q9BV29 185 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 HDHD5Q9BXW7 423 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 ENKD1Q9H0I2 346 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 MRPS18AQ9NVS2 196 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 H2AFY2Q9P0M6 372 aaPredicted RBP13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 C19orf53Q9UNZ5 99 aaPredicted RBP13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 CDH10Q9Y6N8 788 aa13.85□□□□□ -0.19
VIPAS39-202ENST00000343765 IRGMA1A4Y4 181 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 KLF4O43474 513 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 STX11O75558 287 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 CELP19835 753 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 SSTR4P31391 388 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 GABRA3P34903 492 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 NKX2-5P52952 324 aaPredicted RBP13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 BNC1Q01954 994 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 DUSP8Q13202 625 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 PLBD1Q6P4A8 553 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 NRARPQ7Z6K4 114 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 SLC22A18ASQ8N1D0 253 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 ZNF619Q8N2I2 560 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 CSNK1A1LQ8N752 337 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 OR51G2Q8NGK0 314 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 FANK1Q8TC84 345 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 GRHL3Q8TE85 626 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 ASB12Q8WXK4 309 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 CCDC3Q9BQI4 270 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 ZNF350Q9GZX5 532 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 PIGUQ9H490 435 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 MARCH7Q9H992 704 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 NLGN3Q9NZ94 848 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 PLEKHB1Q9UF11 243 aaPredicted RBP13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 C2orf74A8MZ97 194 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 IL1AP01583 271 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 MAKP20794 623 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 OR1Q1Q15612 314 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 EIPR1Q53HC9 387 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 ARMC4Q5T2S8 1044 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 FHL5Q5TD97 284 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 FCRLBQ6BAA4 426 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 ZAR1Q86SH2 424 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 SLC37A2Q8TED4 501 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 NEDD4LQ96PU5 975 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 PRSS27Q9BQR3 290 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 ARHGAP9Q9BRR9 750 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 OR52D1Q9H346 318 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 UBQLN3Q9H347 655 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 SF3B6Q9Y3B4 125 aaKnown RBP13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 SPACA6W5XKT8 324 aa13.84□□□□□ -0.19
VIPAS39-202ENST00000343765 COL6A3P12111 3177 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms