RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CCM2Q9BSQ5 444 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 BCAS3Q9H6U6 928 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 PCDHB10Q9UN67 800 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 SCN7AQ01118 1682 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 RCCD1A6NED2 376 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 JTBO76095 146 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 RAB40ALP0C0E4 278 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 NT5EP21589 574 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 PTBP1P26599 531 aaKnown RBP eCLIP5.86□□□□□ -1.47
VCAN-203ENST00000343200 RHBDL3P58872 404 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 MLC1Q15049 377 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ACOT6Q3I5F7 207 aaPredicted RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 CD276Q5ZPR3 534 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 KLBQ86Z14 1044 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ZNF610Q8N9Z0 462 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ADPRHL1Q8NDY3 354 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 RAB40AQ8WXH6 277 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ACSS2Q9NR19 701 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 TMPRSS4Q9NRS4 437 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 OR6C68A6NDL8 312 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 FOXO6A8MYZ6 492 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 NDUFS8O00217 210 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 AP1G1O43747 822 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 MMP20O60882 483 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 JRKO75564 520 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 C1QBP02746 253 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 JAM2P57087 298 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ITPRIPL2Q3MIP1 535 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 OR4K2Q8NGD2 314 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ADAMTS14Q8WXS8 1223 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ECHDC3Q96DC8 303 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 TSSK2Q96PF2 358 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 C20orf24Q9BUV8 137 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 GATA5Q9BWX5 397 aaPredicted RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 PXMP2Q9NR77 195 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 TRAV19A0A0A6YYK7 116 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 M0R2N6 131 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 MATN3O15232 486 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 CNOT4O95628 575 aaKnown RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 TK1P04183 234 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 RFC2P35250 354 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ACVR1BP36896 505 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 MGAT3Q09327 533 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 TAF1AQ15573 450 aaPredicted RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 SERPINA11Q86U17 422 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 OR5D16Q8NGK9 328 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 OR5W2Q8NH69 310 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 CYP2W1Q8TAV3 490 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 NSUN4Q96CB9 384 aaKnown RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 P2RY11Q96G91 374 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 INTS14Q96SY0 518 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 INPP5EQ9NRR6 644 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 KCNG2Q9UJ96 466 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 OR1F1O43749 312 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 PYCR1P32322 319 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 THBS2P35442 1172 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 SFRP5Q5T4F7 317 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 NANOGP8Q6NSW7 305 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 LRRC55Q6ZSA7 311 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 UNC93AQ86WB7 457 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 FAM129CQ86XR2 697 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 FAM110BQ8TC76 370 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 MBD3L1Q8WWY6 194 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 POM121Q96HA1 1249 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 DUSP9Q99956 384 aaKnown RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 GSX2Q9BZM3 304 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 NANOGQ9H9S0 305 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ASB6Q9NWX5 421 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 C19orf81C9J6K1 198 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 CILPO75339 1184 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 PLGP00747 810 aaPredicted RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 TRHRP34981 398 aaPredicted RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 CHRNEQ04844 493 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 OPCMLQ14982 345 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 LAPTM4AQ15012 233 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 NRARPQ7Z6K4 114 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 FJX1Q86VR8 437 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 OR5AK2Q8NH90 309 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 TFAP2CQ92754 450 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 DNAJC5Q9H3Z4 198 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 ZNF442Q9H7R0 627 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 SEC61A2Q9H9S3 476 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 GPSM3Q9Y4H4 160 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 PCDHB9Q9Y5E1 797 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 NYNRINQ9P2P1 1898 aaKnown RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 H3BSH0 61 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 DVL1O14640 695 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 MSI1O43347 362 aaKnown RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 RGS11O94810 467 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 IL1BP01584 269 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 FABP4P15090 132 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 DTYMKP23919 212 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 IDUAP35475 653 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 DVL1P1P54792 670 aaPredicted RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 OR10A3P58181 314 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 SIM1P81133 766 aaPredicted RBP5.85□□□□□ -1.47
VCAN-203ENST00000343200 PCLAFQ15004 111 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 SEZ6Q53EL9 994 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 NPAS3Q8IXF0 933 aa5.85□□□□□ -1.47
VCAN-203ENST00000343200 CHST13Q8NET6 341 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms