RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 DSN1Q9H410 356 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 PIGUQ9H490 435 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 MEAF6Q9HAF1 191 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 UBQLN4Q9NRR5 601 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 STOML1Q9UBI4 398 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 FAF1Q9UNN5 650 aaPredicted RBP12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 RRP15Q9Y3B9 282 aaKnown RBP12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 HCFC1P51610 2035 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 A0A087WZY1 265 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 A0A1W2PQD3 144 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 ENO4A6NNW6 628 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 SLCO1B7G3V0H7 640 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 RNASET2O00584 256 aaKnown RBP12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 IGKV1D-16P01601 117 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 HPGDP15428 266 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 LBPP18428 481 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 BMP5P22003 454 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 CTSSP25774 331 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 ASCL1P50553 236 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 CLNS1AP54105 237 aaKnown RBP12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 POU6F2P78424 691 aaPredicted RBP12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 OCRLQ01968 901 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 BST1Q10588 318 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 STX5Q13190 355 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 TP53BP2Q13625 1128 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 LASP1Q14847 261 aaKnown RBP12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 GRAMD1BQ3KR37 738 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 ANXA8L1Q5VT79 327 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 RAET1LQ5VY80 246 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 OGFOD2Q6N063 350 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 MARCH3Q86UD3 253 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 LIX1LQ8IVB5 337 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 ZNF295-AS1Q8N0V1 137 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 ANKRD42Q8N9B4 389 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 ZNF527Q8NB42 609 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 VPS37AQ8NEZ2 397 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 TNIP2Q8NFZ5 429 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 ACTRT2Q8TDY3 377 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 DUSP19Q8WTR2 217 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 TESCQ96BS2 214 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 SFXN3Q9BWM7 321 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 DPY30Q9C005 99 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 ZNF395Q9H8N7 513 aaPredicted RBP12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 MCCC2Q9HCC0 563 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 THAP1Q9NVV9 213 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 FLRT3Q9NZU0 649 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 TACC2O95359 2948 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 CSMD2Q7Z408 3487 aa12.08□□□□□ -0.48
SIRPB3P-201ENST00000340424 MYO9AB2RTY4 2548 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 DUXAA6NLW8 204 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 TRPC5OSA6NMA1 111 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 SYT5O00445 386 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 SCDO00767 359 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 CFLARO15519 480 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 NDUFB5O43674 189 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 SNNO75324 88 aaPredicted RBP12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 OXSR1O95747 527 aaPredicted RBP12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 C6orf47O95873 294 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 AK1P00568 194 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 ZNF17P17021 662 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 HK1P19367 917 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 POU3F2P20265 443 aaPredicted RBP12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 EFNA1P20827 205 aaPredicted RBP12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 ATP6V1C1P21283 382 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 ZNF136P52737 540 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 CLDN18P56856 261 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 B3GALT5-AS1P59052 145 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 MAGOHP61326 146 aaKnown RBP12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 CHMP1BQ7LBR1 199 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 MEIOBQ8N635 442 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 NAXEQ8NCW5 288 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 FBXO30Q8TB52 745 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 ADAMTS15Q8TE58 950 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 TLCD1Q96CP7 247 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 CHMP6Q96FZ7 201 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 C16orf58Q96GQ5 468 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 LURAP1Q96LR2 239 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 TUBA1CQ9BQE3 449 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 NUF2Q9BZD4 464 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 CXorf36Q9H7Y0 433 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 TMBIM4Q9HC24 238 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 GPATCH2Q9NW75 528 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 MED11Q9P086 117 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 PCDHGB4Q9UN71 923 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 RPH3AQ9Y2J0 694 aaPredicted RBP12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 AP4B1Q9Y6B7 739 aa12.07□□□□□ -0.48
SIRPB3P-201ENST00000340424 C7orf72A4D263 438 aa12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 CLCA1A8K7I4 914 aa12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 HMGB1P1B2RPK0 211 aaPredicted RBP12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 B4DXG7 233 aa12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 H3BNH8 94 aa12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 HDAC3O15379 428 aa12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 HCRTR2O43614 444 aa12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 RCBTB2O95199 551 aa12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 CRHP06850 196 aa12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 TMIGD3P0DMS9 266 aaPredicted RBP12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 DGKQP52824 942 aa12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 WDR4P57081 412 aaKnown RBP12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 HBA1P69905 142 aa12.06□□□□□ -0.48
SIRPB3P-201ENST00000340424 TLE4Q04727 773 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms